RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 FAM171BQ6P995 826 aa23.38■■□□□ 1.33
PDLIM2-202ENST00000308354 COLGALT2Q8IYK4 626 aa23.38■■□□□ 1.33
PDLIM2-202ENST00000308354 TTC13Q8NBP0 860 aa23.38■■□□□ 1.33
PDLIM2-202ENST00000308354 URGCPQ8TCY9 931 aa23.38■■□□□ 1.33
PDLIM2-202ENST00000308354 FTHL17Q9BXU8 183 aa23.38■■□□□ 1.33
PDLIM2-202ENST00000308354 MDM4O15151 490 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 RGS16O15492 202 aaPredicted RBP23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 CCT5P48643 541 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 PDK2Q15119 407 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 SLC25A52Q3SY17 297 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 OTUD1Q5VV17 481 aaPredicted RBP23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 PYROXD2Q8N2H3 581 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 PQLC3Q8N755 202 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 BBOF1Q8ND07 529 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 PCDH19Q8TAB3 1148 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 ADAM32Q8TC27 787 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 LRRN4Q8WUT4 740 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 TMEM109Q9BVC6 243 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 TSPYL1Q9H0U9 437 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 ADAM7Q9H2U9 754 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 AP4E1Q9UPM8 1137 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 TET1Q8NFU7 2136 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 HHLA1C9JL84 531 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 DAB1O75553 588 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 CCL5P13501 91 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 NME3Q13232 169 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 UNC45BQ8IWX7 931 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 EPN3Q9H201 632 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 HCSTQ9UBK5 93 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 DSEQ9UL01 958 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 HEY1Q9Y5J3 304 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 TSC2P49815 1807 aa23.37■■□□□ 1.33
PDLIM2-202ENST00000308354 RASGRF2O14827 1237 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 FYNP06241 537 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 RBP3P10745 1247 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 L1CAMP32004 1257 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 DAOAP59103 153 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 IFI35P80217 286 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 YWHAHQ04917 246 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 KYNUQ16719 465 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 PLEKHG4Q58EX7 1191 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 C6orf118Q5T5N4 469 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 HIBCHQ6NVY1 386 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 P3H4Q92791 437 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 FAM193BQ96PV7 902 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 PKMYT1Q99640 499 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 TMEM161AQ9NX61 479 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 M0QYT0 321 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 TTC4O95801 387 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 NOS2P35228 1153 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 SEC24CP53992 1094 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 CCL23P55773 120 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 THEM5Q8N1Q8 247 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 PLD5Q8N7P1 536 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 FAM71DQ8N9W8 422 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 RSAD2Q8WXG1 361 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 BEGAINQ9BUH8 593 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 POPDC2Q9HBU9 364 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 MTMR10Q9NXD2 777 aa23.36■■□□□ 1.33
PDLIM2-202ENST00000308354 NDUFAB1O14561 156 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 CAPN9O14815 690 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 MCF2LO15068 1137 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 TFDP2Q14188 446 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 LONRF1Q17RB8 773 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 RAB41Q5JT25 222 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 STRADAQ7RTN6 431 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 KCTD15Q96SI1 283 aaPredicted RBP23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 ABI1Q8IZP0 508 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 CCDC33Q8N5R6 958 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 CCHCR1Q8TD31 782 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 EDEM1Q92611 657 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 NPY6RQ99463 290 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 PPP1R12CQ9BZL4 782 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 CSNK1G1Q9HCP0 422 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 PPANQ9NQ55 473 aaKnown RBP23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 NINJ2Q9NZG7 142 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 PCDHB7Q9Y5E2 793 aa23.35■■□□□ 1.33
PDLIM2-202ENST00000308354 DNALI1O14645 258 aaPredicted RBP23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 ZBED1O96006 694 aa23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 CYP2F1P24903 491 aa23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 IFRD2Q12894 506 aaPredicted RBP23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 AUHQ13825 339 aaKnown RBP23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 NOMO1Q15155 1222 aa23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 DPYSL2Q16555 572 aa23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 CROCCP2Q86T23 111 aa23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 SLC7A14Q8TBB6 771 aa23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 MDM1Q8TC05 714 aa23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 SLC2A13Q96QE2 648 aa23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 NCAPGQ9BPX3 1015 aa23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 CNGB3Q9NQW8 809 aa23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 PCDHB8Q9UN66 801 aa23.34■■□□□ 1.33
PDLIM2-202ENST00000308354 APOL1O14791 398 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 NCAM1P13591 858 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 TSPY1Q01534 308 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 DARS2Q6PI48 645 aaKnown RBP23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 NT5C3BQ969T7 300 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 B3GALT6Q96L58 329 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 PCDH9Q9HC56 1237 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 PIGVQ9NUD9 493 aa23.33■■□□□ 1.33
PDLIM2-202ENST00000308354 KANSL3Q9P2N6 904 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms