RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 ARHGAP18Q8N392 663 aa16.4■□□□□ 0.22
FANCA-201ENST00000305699 PPM1KQ8N3J5 372 aa16.4■□□□□ 0.22
FANCA-201ENST00000305699 IL17RCQ8NAC3 791 aa16.4■□□□□ 0.22
FANCA-201ENST00000305699 LOXL4Q96JB6 756 aa16.4■□□□□ 0.22
FANCA-201ENST00000305699 XPO6Q96QU8 1125 aaKnown RBP16.4■□□□□ 0.22
FANCA-201ENST00000305699 BBS2Q9BXC9 721 aa16.4■□□□□ 0.22
FANCA-201ENST00000305699 DNAJC17Q9NVM6 304 aaKnown RBP16.4■□□□□ 0.22
FANCA-201ENST00000305699 INVSQ9Y283 1065 aa16.4■□□□□ 0.22
FANCA-201ENST00000305699 A0A0A0MRY4 1105 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 DCLK1O15075 740 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 GREM1O60565 184 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 ALDH1A2O94788 518 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 EPN2O95208 641 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 YWHAGP61981 247 aaKnown RBP eCLIP16.39■□□□□ 0.21
FANCA-201ENST00000305699 PDE4CQ08493 712 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 BST2Q10589 180 aaKnown RBP16.39■□□□□ 0.21
FANCA-201ENST00000305699 PAK1Q13153 545 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 CCDC6Q16204 474 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 PLK5Q496M5 336 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 HSF5Q4G112 596 aaPredicted RBP16.39■□□□□ 0.21
FANCA-201ENST00000305699 USP39Q53GS9 565 aaKnown RBP16.39■□□□□ 0.21
FANCA-201ENST00000305699 EOGTQ5NDL2 527 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 C10orf76Q5T2E6 689 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 TMEM270Q6UE05 265 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 TMEM92Q6UXU6 159 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 PHTF2Q8N3S3 785 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 TERB1Q8NA31 727 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 BHMTQ93088 406 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 LRRC4Q9HBW1 653 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 POLMQ9NP87 494 aaPredicted RBP16.39■□□□□ 0.21
FANCA-201ENST00000305699 WDR35Q9P2L0 1181 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 PCDHB4Q9Y5E5 795 aa16.39■□□□□ 0.21
FANCA-201ENST00000305699 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.38■□□□□ 0.21
FANCA-201ENST00000305699 SGK1O00141 431 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 TULP2O00295 520 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 XPO1O14980 1071 aaKnown RBP16.38■□□□□ 0.21
FANCA-201ENST00000305699 TRIM24O15164 1050 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 STC2O76061 302 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 RHOBTB1O94844 696 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 ZBED1O96006 694 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 VDRP11473 427 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 TYRP14679 529 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 KIR2DL1P43626 348 aaPredicted RBP16.38■□□□□ 0.21
FANCA-201ENST00000305699 COG7P83436 770 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 RAB41Q5JT25 222 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 ZNF276Q8N554 614 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 ZNF513Q8N8E2 541 aaPredicted RBP16.38■□□□□ 0.21
FANCA-201ENST00000305699 UBA3Q8TBC4 463 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 ZC3H10Q96K80 434 aaKnown RBP16.38■□□□□ 0.21
FANCA-201ENST00000305699 CNOT6LQ96LI5 555 aaKnown RBP16.38■□□□□ 0.21
FANCA-201ENST00000305699 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
FANCA-201ENST00000305699 ULBP1Q9BZM6 244 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 BCCIPQ9P287 314 aaKnown RBP eCLIP16.38■□□□□ 0.21
FANCA-201ENST00000305699 STRIP2Q9ULQ0 834 aa16.38■□□□□ 0.21
FANCA-201ENST00000305699 CACNG3O60359 315 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 FOXD2O60548 495 aaPredicted RBP16.37■□□□□ 0.21
FANCA-201ENST00000305699 GNA14O95837 355 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 ATXN1P54253 815 aaKnown RBP16.37■□□□□ 0.21
FANCA-201ENST00000305699 ADIGQ0VDE8 80 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 FOXR2Q6PJQ5 311 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 TRMT11Q7Z4G4 463 aaKnown RBP16.37■□□□□ 0.21
FANCA-201ENST00000305699 RASSF3Q86WH2 238 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 SIX6OS1Q8N1H7 587 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 PGBD3Q8N328 593 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 UBR7Q8N806 425 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 C12orf50Q8NA57 414 aaPredicted RBP16.37■□□□□ 0.21
FANCA-201ENST00000305699 MDGA1Q8NFP4 955 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 NETO1Q8TDF5 533 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 NDRG1Q92597 394 aaKnown RBP16.37■□□□□ 0.21
FANCA-201ENST00000305699 SRRTQ9BXP5 876 aaKnown RBP16.37■□□□□ 0.21
FANCA-201ENST00000305699 DCLK3Q9C098 648 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 DUSP15Q9H1R2 295 aaPredicted RBP16.37■□□□□ 0.21
FANCA-201ENST00000305699 PLK2Q9NYY3 685 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 MARK1Q9P0L2 795 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 MARCH2Q9P0N8 246 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 KIAA1257Q9ULG3 409 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 ZNF510Q9Y2H8 683 aa16.37■□□□□ 0.21
FANCA-201ENST00000305699 MYO18AQ92614 2054 aaKnown RBP16.37■□□□□ 0.21
FANCA-201ENST00000305699 TCRBV21S2A2A0A5A6 115 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 SLC12A8A0AV02 714 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 O00370 1275 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 PMM2O15305 246 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 P4HA2O15460 535 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 PAEPP09466 180 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 HNRNPLP14866 589 aaKnown RBP eCLIP16.36■□□□□ 0.21
FANCA-201ENST00000305699 CORO1AP31146 461 aaKnown RBP16.36■□□□□ 0.21
FANCA-201ENST00000305699 UBE2HP62256 183 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 KCNH2Q12809 1159 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 SF3A2Q15428 464 aaKnown RBP16.36■□□□□ 0.21
FANCA-201ENST00000305699 CAMK4Q16566 473 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 AASDHQ4L235 1098 aaPredicted RBP16.36■□□□□ 0.21
FANCA-201ENST00000305699 Q6ZNB5 142 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 RRAGAQ7L523 313 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 C11orf74Q86VG3 221 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 HMGB4Q8WW32 186 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 KAT5Q92993 513 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 RTKNQ9BST9 563 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 PCDHGA5Q9Y5G8 931 aa16.36■□□□□ 0.21
FANCA-201ENST00000305699 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.36■□□□□ 0.21
FANCA-201ENST00000305699 GDF9O60383 454 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms