RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 SDR16C5Q8N3Y7 309 aa6.17□□□□□ -1.42
ZNF440-201ENST00000304060 CCDC112Q8NEF3 446 aa6.17□□□□□ -1.42
ZNF440-201ENST00000304060 SCG3Q8WXD2 468 aaKnown RBP6.17□□□□□ -1.42
ZNF440-201ENST00000304060 ERCC4Q92889 916 aaPredicted RBP6.17□□□□□ -1.42
ZNF440-201ENST00000304060 CHFRQ96EP1 664 aa6.17□□□□□ -1.42
ZNF440-201ENST00000304060 SPATA17Q96L03 361 aa6.17□□□□□ -1.42
ZNF440-201ENST00000304060 SLC2A11Q9BYW1 496 aa6.17□□□□□ -1.42
ZNF440-201ENST00000304060 PHTF1Q9UMS5 762 aa6.17□□□□□ -1.42
ZNF440-201ENST00000304060 DOCK8Q8NF50 2099 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 A0A087WV48 116 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 ZNF233A6NK53 670 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 PFKFB2O60825 505 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 TNNI1P19237 187 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 CSRP3P50461 194 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 FXR2P51116 673 aaKnown RBP eCLIP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 YWHAEP62258 255 aaKnown RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 GRIN1Q05586 938 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 STAT4Q14765 748 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 ZNF77Q15935 545 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 WLSQ5T9L3 541 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 FAM46CQ5VWP2 391 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 ZNF776Q68DI1 518 aaPredicted RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 NUP93Q8N1F7 819 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 ZNF579Q8NAF0 562 aaKnown RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 OLIG1Q8TAK6 271 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 TOE1Q96GM8 510 aaKnown RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 DPH1Q9BZG8 443 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 TUBGCP4Q9UGJ1 667 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 CLCA2Q9UQC9 943 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 SNX14Q9Y5W7 946 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 M0QYT0 321 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 CDX4O14627 284 aaPredicted RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 IPO7O95373 1038 aaKnown RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 F11P03951 625 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 MAN1A1P33908 653 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 PTGER3P43115 390 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 CACNB1Q02641 598 aaPredicted RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 OVGP1Q12889 678 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 MAP7D1Q3KQU3 841 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 CFAP221Q4G0U5 840 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 DCAF12L1Q5VU92 463 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 MED8Q96G25 268 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 PCMTD1Q96MG8 357 aaPredicted RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 LLPHQ9BRT6 129 aaKnown RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 TRIM62Q9BVG3 475 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 CCSER1Q9C0I3 900 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 SMG9Q9H0W8 520 aaKnown RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 SYNDIG1Q9H7V2 258 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 CAPN10Q9HC96 672 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 DMAP1Q9NPF5 467 aaPredicted RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 TMEM63CQ9P1W3 806 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 ARHGAP28Q9P2N2 729 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 RRP15Q9Y3B9 282 aaKnown RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 FANCMQ8IYD8 2048 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 A8MXQ7 604 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 PES1O00541 588 aaKnown RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 ASLP04424 464 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 GNL1P36915 607 aaPredicted RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 HARS2P49590 506 aaKnown RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 SLC10A6Q3KNW5 377 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 LY6G5CQ5SRR4 150 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 CCDC81Q6ZN84 652 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 FAM174AQ8TBP5 190 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 MAGEC3Q8TD91 643 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 C8orf48Q96LL4 319 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 MYRFLQ96LU7 910 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 CCDC113Q9H0I3 377 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 SPHK2Q9NRA0 654 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 ETAA1Q9NY74 926 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 SLC12A6Q9UHW9 1150 aa6.16□□□□□ -1.42
ZNF440-201ENST00000304060 MBD1Q9UIS9 605 aaPredicted RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 GOLGA4Q13439 2230 aaKnown RBP6.16□□□□□ -1.42
ZNF440-201ENST00000304060 TTC26A0AVF1 554 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 PPFIA2O75334 1257 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 LARGE1O95461 756 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 CYP17A1P05093 508 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 EPHX1P07099 455 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 PLA2G4BP0C869 781 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 ZNF18P17022 549 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 POLR2BP30876 1174 aaKnown RBP6.15□□□□□ -1.42
ZNF440-201ENST00000304060 PRPHP41219 470 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 RECQLP46063 649 aaPredicted RBP6.15□□□□□ -1.42
ZNF440-201ENST00000304060 CETN1Q12798 172 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 CSGALNACT2Q8N6G5 542 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 ATL2Q8NHH9 583 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 HAS1Q92839 578 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 MIEF2Q96C03 454 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 MRPL44Q9H9J2 332 aaKnown RBP6.15□□□□□ -1.42
ZNF440-201ENST00000304060 OLA1Q9NTK5 396 aaKnown RBP6.15□□□□□ -1.42
ZNF440-201ENST00000304060 TBC1D7Q9P0N9 293 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 DENND4AQ7Z401 1863 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 PTPRJQ12913 1337 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 METTL12A8MUP2 240 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 HOXC11O43248 304 aaPredicted RBP6.15□□□□□ -1.42
ZNF440-201ENST00000304060 SEMA4FO95754 770 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 CD27P26842 260 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 ATP1A2P50993 1020 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 COPB1P53618 953 aaKnown RBP6.15□□□□□ -1.42
ZNF440-201ENST00000304060 VAC14Q08AM6 782 aa6.15□□□□□ -1.42
ZNF440-201ENST00000304060 DDR2Q16832 855 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms