RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 CUL2Q13617 745 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 CBWD6Q4V339 395 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 RAB41Q5JT25 222 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 CBWD3Q5JTY5 395 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 CBWD5Q5RIA9 395 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 PMS2CLQ68D20 193 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 IL31Q6EBC2 164 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 GRAMD4Q6IC98 578 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 ZNF513Q8N8E2 541 aaPredicted RBP17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 NAT16Q8N8M0 369 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 OLIG1Q8TAK6 271 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 SLC35C1Q96A29 364 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 BBS2Q9BXC9 721 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 TPSD1Q9BZJ3 242 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 KIAA1257Q9ULG3 409 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 PLXND1Q9Y4D7 1925 aa17.52■□□□□ 0.4
TRAPPC1-201ENST00000303731 NUP205Q92621 2012 aa17.52■□□□□ 0.39
TRAPPC1-201ENST00000303731 THADAQ6YHU6 1953 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 BCLAF3A2AJT9 711 aaKnown RBP17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 DCDC2BA2VCK2 349 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 NEDD8-MDP1E9PL57 170 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 SGK1O00141 431 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 PMM2O15305 246 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 TYRP14679 529 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 CHKAP35790 457 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 BCAT1P54687 386 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 MESP2Q0VG99 397 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 SGO2Q562F6 1265 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 SPDYCQ5MJ68 293 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 C10orf76Q5T2E6 689 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 TMEM92Q6UXU6 159 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 Q6ZNB5 142 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 SCD5Q86SK9 330 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 PIGZQ86VD9 579 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 TATDN2Q93075 761 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 WBP2Q969T9 261 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 ARID3AQ99856 593 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 DNAJC17Q9NVM6 304 aaKnown RBP17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 BCCIPQ9P287 314 aaKnown RBP eCLIP17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 HESX1Q9UBX0 185 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 STRIP2Q9ULQ0 834 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 ABCA7Q8IZY2 2146 aa17.51■□□□□ 0.39
TRAPPC1-201ENST00000303731 BICDL2A1A5D9 508 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 XPO1O14980 1071 aaKnown RBP17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 DCLK1O15075 740 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 ZBTB24O43167 697 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 GDF9O60383 454 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 STC2O76061 302 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 CAVIN2O95810 425 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 DPP6P42658 865 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 PMS1P54277 932 aaKnown RBP17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 CREB5Q02930 508 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 E2F5Q15329 346 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 SF3A2Q15428 464 aaKnown RBP17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 SDE2Q6IQ49 451 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 TTC30AQ86WT1 665 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 MIB1Q86YT6 1006 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 SFTPA1Q8IWL2 248 aa17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 OLA1Q9NTK5 396 aaKnown RBP17.5■□□□□ 0.39
TRAPPC1-201ENST00000303731 TRIM49BA6NDI0 452 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 P4HA2O15460 535 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 ADAM23O75077 832 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 VDRP11473 427 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 NTSR1P30989 418 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 P2RY2P41231 377 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 FMO5P49326 533 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 DGKGP49619 791 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 BST2Q10589 180 aaKnown RBP17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 EMC10Q5UCC4 262 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 PM20D1Q6GTS8 502 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 TPGS1Q6ZTW0 290 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 RSRC2Q7L4I2 434 aaKnown RBP17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 LRRC4Q9HBW1 653 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 RASAL2Q9UJF2 1139 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 TSPAN16Q9UKR8 245 aa17.49■□□□□ 0.39
TRAPPC1-201ENST00000303731 TCRBV21S2A2A0A5A6 115 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 NPC1O15118 1278 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 MDM4O15151 490 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 GNA14O95837 355 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 ZBED1O96006 694 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 SETSIPP0DME0 302 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 HOXB2P14652 356 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 HNRNPLP14866 589 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 TKTL1P51854 596 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 YWHAGP61981 247 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 EFEMP1Q12805 493 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 STILQ15468 1287 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 CCDC6Q16204 474 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 GOLGA7BQ2TAP0 167 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 CCDC40Q4G0X9 1142 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 PPM1JQ5JR12 505 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 LPCAT2Q7L5N7 544 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 CYP2U1Q7Z449 544 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 HMGB4Q8WW32 186 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 ERCC4Q92889 916 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 NT5C1BQ96P26 610 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 MARCH2Q9P0N8 246 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 NUDT5Q9UKK9 219 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 MAN1B1Q9UKM7 699 aa17.48■□□□□ 0.39
TRAPPC1-201ENST00000303731 GFRA2O00451 464 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms