RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PIK3R5Q8WYR1 880 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 FRMPD3Q5JV73 1810 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 TLDC2A0PJX2 215 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 UPP2O95045 317 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 OR4Q2P0C623 313 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 TGM2P21980 687 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 CYP4V2Q6ZWL3 525 aaPredicted RBP15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 FAM71DQ8N9W8 422 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 ADAM32Q8TC27 787 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 EDEM1Q92611 657 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 ARL8AQ96BM9 186 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 SH3GL2Q99962 352 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 MRPL9Q9BYD2 267 aaKnown RBP15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 SEMA4AQ9H3S1 761 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 TMLHEQ9NVH6 421 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 DDIT4Q9NX09 232 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 ADAM28Q9UKQ2 775 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 ATP11BQ9Y2G3 1177 aa15.09■□□□□ 0.01
SHCBP1-201ENST00000303383 SMIM23A6NLE4 172 aa15.08■□□□□ 0.01
SHCBP1-201ENST00000303383 DNALI1O14645 258 aaPredicted RBP15.08■□□□□ 0.01
SHCBP1-201ENST00000303383 KLRC2P26717 231 aa15.08■□□□□ 0.01
SHCBP1-201ENST00000303383 ARL13BQ3SXY8 428 aa15.08■□□□□ 0.01
SHCBP1-201ENST00000303383 CTXN3Q4LDR2 81 aa15.08■□□□□ 0.01
SHCBP1-201ENST00000303383 SYPL2Q5VXT5 272 aa15.08■□□□□ 0.01
SHCBP1-201ENST00000303383 PCGF5Q86SE9 256 aa15.08■□□□□ 0.01
SHCBP1-201ENST00000303383 TRIM62Q9BVG3 475 aa15.08■□□□□ 0.01
SHCBP1-201ENST00000303383 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.08■□□□□ 0.01
SHCBP1-201ENST00000303383 CREB3O43889 395 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 B4GALT3O60512 393 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 ENDOD1O94919 500 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 TLE2Q04725 743 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 SLC29A2Q14542 456 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 DPYSL2Q16555 572 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 NFE2Q16621 373 aaPredicted RBP15.08■□□□□ 0
SHCBP1-201ENST00000303383 SLC39A5Q6ZMH5 540 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 LRRTM3Q86VH5 581 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 H3BRJ5 948 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 TMEM189-UBE2V1I3L0A0 370 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 MAP3K6O95382 1288 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 PARNO95453 639 aaKnown RBP15.08■□□□□ 0
SHCBP1-201ENST00000303383 ACSL3O95573 720 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 IVDP26440 423 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 STIP1P31948 543 aaKnown RBP15.08■□□□□ 0
SHCBP1-201ENST00000303383 L1CAMP32004 1257 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 CYP2C18P33260 490 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 LMAN1P49257 510 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 GATMP50440 423 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 NOMO1Q15155 1222 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 TERF2Q15554 542 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 TRMT10CQ7L0Y3 403 aaKnown RBP15.08■□□□□ 0
SHCBP1-201ENST00000303383 NPAS4Q8IUM7 802 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 GLIS1Q8NBF1 620 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 NPY6RQ99463 290 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 NRDE2Q9H7Z3 1164 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 RRN3Q9NYV6 651 aa15.08■□□□□ 0
SHCBP1-201ENST00000303383 BASP1P80723 227 aaKnown RBP15.07■□□□□ 0
SHCBP1-201ENST00000303383 ZNF280DQ6N043 979 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 B4GALNT4Q76KP1 1039 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 PLD5Q8N7P1 536 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 PCDH19Q8TAB3 1148 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 SLC2A13Q96QE2 648 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 CSNK1G1Q9HCP0 422 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 TMEM30AQ9NV96 361 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 SYN3O14994 580 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 CPB1P15086 417 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 PITX1P78337 314 aaPredicted RBP15.07■□□□□ 0
SHCBP1-201ENST00000303383 TRIM60Q495X7 471 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 CTU1Q7Z7A3 348 aaKnown RBP15.07■□□□□ 0
SHCBP1-201ENST00000303383 VSIG1Q86XK7 387 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 KCTD15Q96SI1 283 aaPredicted RBP15.07■□□□□ 0
SHCBP1-201ENST00000303383 C11orf84Q9BUA3 381 aaPredicted RBP15.07■□□□□ 0
SHCBP1-201ENST00000303383 NEU2Q9Y3R4 380 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 HMGB1P1B2RPK0 211 aaPredicted RBP15.07■□□□□ 0
SHCBP1-201ENST00000303383 KCNN4O15554 427 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 F9P00740 461 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 CHKAP35790 457 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 ZNF844Q08AG5 666 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 RAB41Q5JT25 222 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 VARS2Q5ST30 1063 aaKnown RBP15.07■□□□□ 0
SHCBP1-201ENST00000303383 BTBD8Q5XKL5 378 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 UNC45BQ8IWX7 931 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 IRGQQ8WZA9 623 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 ATP6V1G3Q96LB4 118 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 RBM15Q96T37 977 aaKnown RBP eCLIP15.07■□□□□ 0
SHCBP1-201ENST00000303383 FERMT1Q9BQL6 677 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 FOXP3Q9BZS1 431 aa15.07■□□□□ 0
SHCBP1-201ENST00000303383 CDC42EP4Q9H3Q1 356 aaKnown RBP15.07■□□□□ 0
SHCBP1-201ENST00000303383 SF3B1O75533 1304 aaKnown RBP eCLIP15.06■□□□□ 06e-6■■■■■ 103.4
SHCBP1-201ENST00000303383 CTCFP49711 727 aaPredicted RBP15.06■□□□□ 0
SHCBP1-201ENST00000303383 MORF4L2Q15014 288 aa15.06■□□□□ 0
SHCBP1-201ENST00000303383 BSPRYQ5W0U4 402 aa15.06■□□□□ 0
SHCBP1-201ENST00000303383 ZNF771Q7L3S4 317 aaPredicted RBP15.06■□□□□ 0
SHCBP1-201ENST00000303383 CROCCP2Q86T23 111 aa15.06■□□□□ 0
SHCBP1-201ENST00000303383 TMEM39AQ9NV64 488 aa15.06■□□□□ 0
SHCBP1-201ENST00000303383 FZD10Q9ULW2 581 aa15.06■□□□□ 0
SHCBP1-201ENST00000303383 NT5C1B-RDH14C9J2C7 533 aa15.06■□□□□ 0
SHCBP1-201ENST00000303383 GOT1P17174 413 aa15.06■□□□□ 0
SHCBP1-201ENST00000303383 GDF10P55107 478 aa15.06■□□□□ 0
SHCBP1-201ENST00000303383 ELAVL2Q12926 359 aaKnown RBP15.06■□□□□ 0
SHCBP1-201ENST00000303383 TTMPQ5BVD1 217 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms