RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 TPD52L3Q96J77 140 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 FEM1CQ96JP0 617 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 TIPINQ9BVW5 301 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 OSBPL2Q9H1P3 480 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 SCOCQ9UIL1 159 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 USP18Q9UMW8 372 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 GSAPA4D1B5 854 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 HMGB1P1B2RPK0 211 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-201ENST00000303354 NEDD8-MDP1E9PL57 170 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 SLC2A4P14672 509 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 RFX5P48382 616 aaPredicted RBP8.04□□□□□ -1.12
SCN9A-201ENST00000303354 THOP1P52888 689 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 DEPDC1Q5TB30 811 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 TRAPPC11Q7Z392 1133 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 KRT78Q8N1N4 520 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 SPATA4Q8NEY3 305 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 IL17RAQ96F46 866 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 TSPAN17Q96FV3 270 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 SCLYQ96I15 445 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 TMPRSS4Q9NRS4 437 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 GEMIN8Q9NWZ8 242 aaKnown RBP8.04□□□□□ -1.12
SCN9A-201ENST00000303354 RNF14Q9UBS8 474 aa8.04□□□□□ -1.12
SCN9A-201ENST00000303354 XYLBO75191 536 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 CAPN1P07384 714 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 GRK3P35626 688 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 PLK1P53350 603 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 UBXN2BQ14CS0 331 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 LUZP2Q86TE4 346 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 DEFB106AQ8N104 65 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 KCNB2Q92953 911 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 WDR19Q8NEZ3 1342 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 CPS1P31327 1500 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 A0A087X0T9 212 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 FEN1P39748 380 aaKnown RBP8.03□□□□□ -1.12
SCN9A-201ENST00000303354 MAXP61244 160 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 CRADDP78560 199 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 FAM182AQ5T1J6 154 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 AADACL2Q6P093 401 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 PRPF39Q86UA1 669 aaKnown RBP8.03□□□□□ -1.12
SCN9A-201ENST00000303354 SYT17Q9BSW7 474 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 ULBP1Q9BZM6 244 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 ACP6Q9NPH0 428 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 WDR35Q9P2L0 1181 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 DYRK3O43781 588 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 RECQL4O94761 1208 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 PGM1P36871 562 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 YWHAZP63104 245 aaKnown RBP8.03□□□□□ -1.12
SCN9A-201ENST00000303354 SKOR1P84550 965 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 OTUD4Q01804 1114 aaKnown RBP8.03□□□□□ -1.12
SCN9A-201ENST00000303354 DAB2IPQ5VWQ8 1189 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 RAET1GQ6H3X3 334 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 NECAB2Q7Z6G3 386 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 FAM111AQ96PZ2 611 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 UBXN6Q9BZV1 441 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 ABHD16BQ9H3Z7 469 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 SPACA6W5XKT8 324 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 MGAT4DA6NG13 374 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 NFIL3Q16649 462 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 NAPEPLDQ6IQ20 393 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 TRPC4APQ8TEL6 797 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 DNAJC1Q96KC8 554 aaKnown RBP8.03□□□□□ -1.12
SCN9A-201ENST00000303354 BTBD9Q96Q07 612 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 IL17RBQ9NRM6 502 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 CD84Q9UIB8 345 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 ZNF541Q9H0D2 1346 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 STRA8Q7Z7C7 330 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 NEUROD4Q9HD90 331 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 PAK5Q9P286 719 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 HPS5Q9UPZ3 1129 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 TULP4Q9NRJ4 1543 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 SEPT4O43236 478 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 DLG4P78352 724 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 CNTN1Q12860 1018 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 EPS8Q12929 822 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 HSP90AA5PQ58FG0 334 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 DACT2Q5SW24 774 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 RARS2Q5T160 578 aaKnown RBP8.03□□□□□ -1.12
SCN9A-201ENST00000303354 ARMCX6Q7L4S7 300 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 FBXO36Q8NEA4 188 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 LGMNQ99538 433 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 TINF2Q9BSI4 451 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 YIPF3Q9GZM5 350 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 HIPK3Q9H422 1215 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 FAM198AQ9UFP1 575 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 OPLAHO14841 1288 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 TP73O15350 636 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 ZNF682O95780 498 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 FYNP06241 537 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 SPRP35270 261 aaPredicted RBP8.03□□□□□ -1.12
SCN9A-201ENST00000303354 BCL2L1Q07817 233 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 CYP51A1Q16850 503 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 HLA-DQA1Q5Y7H0 255 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 CYP20A1Q6UW02 462 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 CAPNS2Q96L46 248 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 TUBB6Q9BUF5 446 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 A1CFQ9NQ94 594 aaKnown RBP8.03□□□□□ -1.12
SCN9A-201ENST00000303354 ZNF112Q9UJU3 913 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 ST3GAL5Q9UNP4 418 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 IQCMA0A1B0GVH7 501 aa8.03□□□□□ -1.12
SCN9A-201ENST00000303354 MYO1CO00159 1063 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms