RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 POLNQ7Z5Q5 900 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 ANKLE1Q8NAG6 615 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 TMEM40Q8WWA1 233 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 ZNF75CPQ92670 426 aaPredicted RBP16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 KHSRPQ92945 711 aaKnown RBP eCLIP16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 SERAC1Q96JX3 654 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 CNPY3Q9BT09 278 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 HEY2Q9UBP5 337 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 PACSIN3Q9UKS6 424 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 VDRP11473 427 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 EDNRBP24530 442 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 MLH1P40692 756 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 ARPP19P56211 112 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 COPS2P61201 443 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 NCALDP61601 193 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 HEATR6Q6AI08 1181 aaKnown RBP16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 NDUFAF2Q8N183 169 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 SLC7A14Q8TBB6 771 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 NSMCE1Q8WV22 266 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 ATXN3LQ9H3M9 355 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 PPARGC1AQ9UBK2 798 aaKnown RBP16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 ZFP69BQ9UJL9 534 aa16.18■□□□□ 0.18
CHAF1A-201ENST00000301280 FAM237BA0A1B0GVD1 139 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 M0QYT0 321 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 B4GALT4O60513 344 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 HUS1O60921 280 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 METTL18O95568 372 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 CDH5P33151 784 aaPredicted RBP16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 ITIH4Q14624 930 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 OTOAQ7RTW8 1153 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 RSPH3Q86UC2 560 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 CCDC125Q86Z20 511 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 ARID3BQ8IVW6 561 aaPredicted RBP16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 DEFB106AQ8N104 65 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 PCDH19Q8TAB3 1148 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 PGBD4Q96DM1 585 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 KCNK16Q96T55 309 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 GCOM2Q9BZD3 368 aaPredicted RBP16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 EBF2Q9HAK2 575 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 AP4E1Q9UPM8 1137 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 PGK1P00558 417 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 AP3M2P53677 418 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 CLNS1AP54105 237 aaKnown RBP16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 ALDH18A1P54886 795 aaKnown RBP16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 VPS52Q8N1B4 723 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 CYTH2Q99418 400 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 SYT17Q9BSW7 474 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 RSAD1Q9HA92 442 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 WDR27A2RRH5 827 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 ABLIM1O14639 778 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 NEBLO76041 1014 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 POMCP01189 267 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 GCAP28676 217 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 CBLBQ13191 982 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 PPP1R15BQ5SWA1 713 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 WSCD1Q658N2 575 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 CGB2Q6NT52 195 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 BBS12Q6ZW61 710 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 SIX6OS1Q8N1H7 587 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 PLD5Q8N7P1 536 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 AZIN2Q96A70 460 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 L3MBTL3Q96JM7 780 aaPredicted RBP16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 TBCBQ99426 244 aa16.17■□□□□ 0.18
CHAF1A-201ENST00000301280 IL18RAPO95256 599 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 ANP32DO95626 131 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 KCNA4P22459 653 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 ACVR2BQ13705 512 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 NLRP9Q7RTR0 991 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 PLPPR4Q7Z2D5 763 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 BEST2Q8NFU1 509 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 FAM136AQ96C01 138 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 RABGEF1Q9UJ41 708 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 GOLGA4Q13439 2230 aaKnown RBP16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 APOC4-APOC2K7ER74 178 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 SPTLC1O15269 473 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 ENTPD5O75356 428 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 APOC2P02655 101 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 ENO1P06733 434 aaKnown RBP16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 PDHA1P08559 390 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 TROVE2P10155 538 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■■■■□ 20.5
CHAF1A-201ENST00000301280 NQO1P15559 274 aaKnown RBP16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 SERPINB3P29508 390 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 ARL4AP40617 200 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 TFDP2Q14188 446 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 GALNTL6Q49A17 601 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 GPR142Q7Z601 462 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 LONP2Q86WA8 852 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 SLC25A41Q8N5S1 370 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 NPLOC4Q8TAT6 608 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 SLC35B2Q8TB61 432 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 MCUR1Q96AQ8 359 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 MAGEB18Q96M61 343 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 ZNF570Q96NI8 536 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 RNF157Q96PX1 679 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 CPSF2Q9P2I0 782 aaKnown RBP16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 PDCD11Q14690 1871 aaKnown RBP16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 BEST1O76090 585 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 SNAI1O95863 264 aaPredicted RBP16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 DGKDQ16760 1214 aa16.16■□□□□ 0.18
CHAF1A-201ENST00000301280 LRRC38Q5VT99 294 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms