RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CARNS1A5YM72 827 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 FAM153BP0C7A2 387 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 OTUD4Q01804 1114 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 MMRN1Q13201 1228 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 NME3Q13232 169 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 FAM153CQ494X1 144 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 ANKRD20A8PQ5CZ79 823 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 PPP6R3Q5H9R7 873 aaPredicted RBP16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 SPOUT1Q5T280 376 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 BSPRYQ5W0U4 402 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 BHLHA9Q7RTU4 235 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 FAM131BQ86XD5 332 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 MREGQ8N565 214 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 ACTL9Q8TC94 416 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 LRRC45Q96CN5 670 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 PGAP3Q96FM1 320 aaPredicted RBP16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 B3GALT6Q96L58 329 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 FMO2Q99518 471 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 CWH43Q9H720 699 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 MTRF1LQ9UGC7 380 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 FAM153AQ9UHL3 310 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 HPCAL4Q9UM19 191 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 SYNJ2BP-COX16A0A087WUM0 186 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 TNFRSF10BO14763 440 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 ITIH2P19823 946 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 L1CAMP32004 1257 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 PLTPP55058 493 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 GPR17Q13304 367 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 OASLQ15646 514 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 CA9Q16790 459 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 USP41Q3LFD5 358 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 RTP2Q5QGT7 225 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 OTUD1Q5VV17 481 aaPredicted RBP16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 TMEM173Q86WV6 379 aaPredicted RBP16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 KRT222Q8N1A0 295 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 CCDC185Q8N715 623 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 BBOF1Q8ND07 529 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 SCAMP5Q8TAC9 235 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 SLC35B2Q8TB61 432 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 SPPL2BQ8TCT7 592 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 C2orf15Q8WU43 125 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 P3H4Q92791 437 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 SNF8Q96H20 258 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 NEUROG2Q9H2A3 272 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 GRHL1Q9NZI5 618 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 COX16Q9P0S2 106 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 CALCOCO1Q9P1Z2 691 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 WHRNQ9P202 907 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 FZD10Q9ULW2 581 aa16.35■□□□□ 0.21
HERPUD1-201ENST00000300302 APOL1O14791 398 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 MCF2LO15068 1137 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 BAIAP3O94812 1187 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 ATF2P15336 505 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 ZFXP17010 805 aaPredicted RBP16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 TGM2P21980 687 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 IL4RP24394 825 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 ADCY8P40145 1251 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 ARPP19P56211 112 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 KCTD19Q17RG1 926 aaPredicted RBP16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 NUP93Q8N1F7 819 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 ALLCQ8N6M5 410 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 BCL7CQ8WUZ0 217 aaPredicted RBP16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 FAF2Q96CS3 445 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 ZNF689Q96CS4 500 aaPredicted RBP16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 IGSF21Q96ID5 467 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 PGLYRP2Q96PD5 576 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 FBXO44Q9H4M3 255 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 FAM204AQ9H8W3 233 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 ABCC13Q9NSE7 274 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 PIGVQ9NUD9 493 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 ZDHHC18Q9NUE0 388 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 RCOR3Q9P2K3 495 aaPredicted RBP16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 NEU2Q9Y3R4 380 aa16.34■□□□□ 0.21
HERPUD1-201ENST00000300302 TBC1D4O60343 1298 aa16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 KRT14P02533 472 aa16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 HSPA9P38646 679 aaKnown RBP16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 ARL4AP40617 200 aa16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 WDR5P61964 334 aaKnown RBP16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 YWHAGP61981 247 aaKnown RBP eCLIP16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 PITX1P78337 314 aaPredicted RBP16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 CAV1Q03135 178 aa16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 IFRD2Q12894 506 aaPredicted RBP16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 ARL13BQ3SXY8 428 aa16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 EFHC2Q5JST6 749 aa16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 EDEM1Q92611 657 aa16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 ART4Q93070 314 aa16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 PRDM16Q9HAZ2 1276 aa16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 DDIT4Q9NX09 232 aa16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 SAE1Q9UBE0 346 aaPredicted RBP16.33■□□□□ 0.21
HERPUD1-201ENST00000300302 SGK1O00141 431 aa16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 EIF3EP60228 445 aaKnown RBP16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 DEFB103AP81534 67 aa16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 TRIP13Q15645 432 aaPredicted RBP16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 BTBD8Q5XKL5 378 aa16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 ALS2CLQ60I27 953 aa16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 SLC9A4Q6AI14 798 aa16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 KIAA1841Q6NSI8 718 aa16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 KCNT2Q6UVM3 1135 aa16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 ZDHHC24Q6UX98 284 aa16.33■□□□□ 0.2
HERPUD1-201ENST00000300302 TAS1R1Q7RTX1 841 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms