RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 KIAA0319LQ8IZA0 1049 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 SPON2Q9BUD6 331 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 PORCNQ9H237 461 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 TMEM63AO94886 807 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 PSMG1O95456 288 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 TSPAN8P19075 237 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 ATP4AP20648 1035 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 FGFR3P22607 806 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 ETFBP38117 255 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 AP3M2P53677 418 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 TNFAIP2Q03169 654 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 YWHAHQ04917 246 aaPredicted RBP13.74□□□□□ -0.21
CASC4-201ENST00000299957 MSS51Q4VC12 460 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 TMEM192Q8IY95 271 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 RNF139Q8WU17 664 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 TFB1MQ8WVM0 346 aaKnown RBP13.74□□□□□ -0.21
CASC4-201ENST00000299957 MFSD14AQ96MC6 490 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 SMARCAD1Q9H4L7 1026 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 PAPOLAP51003 745 aaKnown RBP13.74□□□□□ -0.21
CASC4-201ENST00000299957 GBE1Q04446 702 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 ARL13BQ3SXY8 428 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 PPM1JQ5JR12 505 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 TRMT10BQ6PF06 316 aaKnown RBP13.74□□□□□ -0.21
CASC4-201ENST00000299957 CYP2R1Q6VVX0 501 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 MON1BQ7L1V2 547 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 LMO3Q8TAP4 145 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 PTPRN2Q92932 1015 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 PHF21BQ96EK2 531 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 GON4LQ3T8J9 2241 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 MYPNQ86TC9 1320 aa13.74□□□□□ -0.21
CASC4-201ENST00000299957 ALOX15BO15296 676 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 MAPK10P53779 464 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 SLC45A4Q5BKX6 768 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 LPCAT4Q643R3 524 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 RNF43Q68DV7 783 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 FOXR2Q6PJQ5 311 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 STKLD1Q8NE28 680 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 EMID1Q96A84 441 aaPredicted RBP13.73□□□□□ -0.21
CASC4-201ENST00000299957 ELMO2Q96JJ3 720 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 L3MBTL3Q96JM7 780 aaPredicted RBP13.73□□□□□ -0.21
CASC4-201ENST00000299957 SEMA6AQ9H2E6 1030 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 AAASQ9NRG9 546 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 SETD4Q9NVD3 440 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 MYO18AQ92614 2054 aaKnown RBP13.73□□□□□ -0.21
CASC4-201ENST00000299957 PTPRJQ12913 1337 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 APOC4-APOC2K7ER74 178 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 AKAP10O43572 662 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 APOC2P02655 101 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 GMPRP36959 345 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 GRIA1P42261 906 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 IREB2P48200 963 aaKnown RBP13.73□□□□□ -0.21
CASC4-201ENST00000299957 MRPS22P82650 360 aaKnown RBP13.73□□□□□ -0.21
CASC4-201ENST00000299957 SLC39A4Q6P5W5 647 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 RIPOR1Q6ZS17 1223 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 CCNJLQ8IV13 435 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 CXorf38Q8TB03 319 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 CLEC4DQ8WXI8 215 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 BHMTQ93088 406 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 OMDQ99983 421 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 CAB39LQ9H9S4 337 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 CLIC5Q9NZA1 410 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 MYH11P35749 1972 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 TBC1D12O60347 775 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 CPA3P15088 417 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 SLC1A6P48664 564 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 OGDHQ02218 1023 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 TBL3Q12788 808 aaKnown RBP13.73□□□□□ -0.21
CASC4-201ENST00000299957 BORCS6Q96GS4 357 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 MBOAT7Q96N66 472 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 PNPOQ9NVS9 261 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 TAGLN3Q9UI15 199 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 C5orf60A6NFR6 353 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 ERBB2P04626 1255 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 IRX1P78414 480 aaPredicted RBP13.73□□□□□ -0.21
CASC4-201ENST00000299957 POU5F1Q01860 360 aaKnown RBP13.73□□□□□ -0.21
CASC4-201ENST00000299957 FAM183BPQ6ZVS7 135 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 SAMD3Q8N6K7 520 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 APPL2Q8NEU8 664 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 SERAC1Q96JX3 654 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 SNRNP25Q9BV90 132 aaKnown RBP13.73□□□□□ -0.21
CASC4-201ENST00000299957 ACSS3Q9H6R3 686 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 PLEKHA5Q9HAU0 1116 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 WARS2Q9UGM6 360 aaKnown RBP13.73□□□□□ -0.21
CASC4-201ENST00000299957 HMGXB4Q9UGU5 601 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 SCN11AQ9UI33 1791 aa13.73□□□□□ -0.21
CASC4-201ENST00000299957 ZNF541Q9H0D2 1346 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 SDR42E2A6NKP2 422 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 TM9SF1O15321 606 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 XPOTO43592 962 aaKnown RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 C4BPAP04003 597 aaKnown RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 PAEPP09466 180 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 UNGP13051 313 aaPredicted RBP13.72□□□□□ -0.21
CASC4-201ENST00000299957 IL1R2P27930 398 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 WNT7BP56706 349 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 TGFB2P61812 414 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 PDPK2PQ6A1A2 396 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 SNX31Q8N9S9 440 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 CMTM5Q96DZ9 223 aa13.72□□□□□ -0.21
CASC4-201ENST00000299957 HIC2Q96JB3 615 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms