RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 LPIN3Q9BQK8 851 aa13.96□□□□□ -0.18
CTDP1-202ENST00000299543 RSAD1Q9HA92 442 aa13.96□□□□□ -0.18
CTDP1-202ENST00000299543 ARL8BQ9NVJ2 186 aa13.96□□□□□ -0.18
CTDP1-202ENST00000299543 ZC3H7BQ9UGR2 993 aaKnown RBP13.96□□□□□ -0.18
CTDP1-202ENST00000299543 TSPAN16Q9UKR8 245 aa13.96□□□□□ -0.18
CTDP1-202ENST00000299543 CENPFP49454 3210 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 FAM237BA0A1B0GVD1 139 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 GYG2O15488 501 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 UGT1A9O60656 530 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 GPD1P21695 349 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 SNX30Q5VWJ9 437 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 NIPA2Q8N8Q9 360 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 TMEM120AQ9BXJ8 343 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 B3GNT5Q9BYG0 378 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 LRMDAQ9H2I8 198 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 UGT1A7Q9HAW7 530 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 UGT1A10Q9HAW8 530 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 UGT1A8Q9HAW9 530 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 WASF2Q9Y6W5 498 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 OR6B1O95007 311 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 SKIP12755 728 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 TMPRSS15P98073 1019 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 FAM183BPQ6ZVS7 135 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 ACOT1Q86TX2 421 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 BANPQ8N9N5 519 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 NLRP7Q8WX94 980 aa13.95□□□□□ -0.18
CTDP1-202ENST00000299543 CXorf49A8MYA2 514 aaPredicted RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 CYB561D2O14569 222 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 SUPT3HO75486 399 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 MYL2P10916 166 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 ESRRAP11474 423 aaPredicted RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 ACADSP16219 412 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 DYNC1I2Q13409 638 aaKnown RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 STMN2Q93045 179 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 APOL6Q9BWW8 343 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 ZNF510Q9Y2H8 683 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 SNX9Q9Y5X1 595 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 SLC4A7Q9Y6M7 1214 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 E2F8A0AVK6 867 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 MAGEA13PA6NCF6 341 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 B4GALT4O60513 344 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 GPD2P43304 727 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 ATXN1P54253 815 aaKnown RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 CCDC15Q0P6D6 951 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 KCTD2Q14681 263 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 TSHZ1Q6ZSZ6 1077 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 CMASQ8NFW8 434 aaPredicted RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 PPP1R14CQ8TAE6 165 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 FAM172AQ8WUF8 416 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 NMD3Q96D46 503 aaKnown RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 KIF12Q96FN5 646 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 RILPQ96NA2 401 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 TUBGCP5Q96RT8 1024 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 MAF1Q9H063 256 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 MAGED2Q9UNF1 606 aaPredicted RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 COL11A1P12107 1806 aaPredicted RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 MYO18AQ92614 2054 aaKnown RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 USP2O75604 605 aaPredicted RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 CDH5P33151 784 aaPredicted RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 SKIV2L2P42285 1042 aaKnown RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 TFDP2Q14188 446 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 CA9Q16790 459 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 Q3C1V9 767 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 GLRA4Q5JXX5 417 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 CCDC62Q6P9F0 684 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 CDHR3Q6ZTQ4 885 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 MAP7D3Q8IWC1 876 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 HIC2Q96JB3 615 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 LHX5Q9H2C1 402 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 DHX35Q9H5Z1 703 aaKnown RBP13.94□□□□□ -0.18
CTDP1-202ENST00000299543 ATXN10Q9UBB4 475 aa13.94□□□□□ -0.18
CTDP1-202ENST00000299543 ZBTB42B2RXF5 422 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 ABLIM1O14639 778 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 NDC80O14777 642 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 CAPN15O75808 1086 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 TOP3BO95985 862 aaKnown RBP13.93□□□□□ -0.18
CTDP1-202ENST00000299543 INSRRP14616 1297 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 DESP17661 470 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 STIP1P31948 543 aaKnown RBP13.93□□□□□ -0.18
CTDP1-202ENST00000299543 GOLGA7BQ2TAP0 167 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 SLC45A4Q5BKX6 768 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 TRNP1Q6NT89 227 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 ZCCHC23Q6ZST2 131 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 ACAP3Q96P50 834 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 SRPK1Q96SB4 655 aaKnown RBP13.93□□□□□ -0.18
CTDP1-202ENST00000299543 CNPY3Q9BT09 278 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 VCX3BQ9H321 246 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 VCX3AQ9NNX9 186 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 PPARGC1AQ9UBK2 798 aaKnown RBP13.93□□□□□ -0.18
CTDP1-202ENST00000299543 RBM47A0AV96 593 aaKnown RBP13.93□□□□□ -0.18
CTDP1-202ENST00000299543 C2CD2LO14523 706 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 CILPO75339 1184 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 PDGFRBP09619 1106 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 P4HA1P13674 534 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 PTPN4P29074 926 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 CRADDP78560 199 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 KDSRQ06136 332 aa13.93□□□□□ -0.18
CTDP1-202ENST00000299543 TMEM132DQ14C87 1099 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms