RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PAX3P23760 479 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 TTLL4Q14679 1199 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 B3GALNT2Q8NCR0 500 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 LACRTQ9GZZ8 138 aa15.28■□□□□ 0.04
SCN3B-201ENST00000299333 ZSCAN5CA6NGD5 496 aaPredicted RBP15.27■□□□□ 0.04
SCN3B-201ENST00000299333 TUBA1BP68363 451 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 GPSM2P81274 684 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 PRMT9Q6P2P2 845 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 TUBA1AQ71U36 451 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 BLOC1S5Q8TDH9 187 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 CNPY3Q9BT09 278 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 NUAK2Q9H093 628 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 HOXC10Q9NYD6 342 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 VAV3Q9UKW4 847 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 EFCAB6Q5THR3 1501 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 SGPL1O95470 568 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 IFI35P80217 286 aaPredicted RBP15.27■□□□□ 0.04
SCN3B-201ENST00000299333 FLAD1Q8NFF5 587 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 GPRASP2Q96D09 838 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 SRPK1Q96SB4 655 aaKnown RBP15.27■□□□□ 0.04
SCN3B-201ENST00000299333 CDRT15Q96T59 188 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 RPRD1BQ9NQG5 326 aaKnown RBP15.27■□□□□ 0.04
SCN3B-201ENST00000299333 RAD18Q9NS91 495 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 NCKIPSDQ9NZQ3 722 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 CRLS1Q9UJA2 301 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 PCDHB8Q9UN66 801 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 CPDO75976 1380 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 HEG1Q9ULI3 1381 aa15.27■□□□□ 0.04
SCN3B-201ENST00000299333 ANKARQ7Z5J8 1434 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 AGRPO00253 132 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 MTSS1O43312 755 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 JAK1P23458 1154 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 GPC1P35052 558 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 POC5Q8NA72 575 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 NACC2Q96BF6 587 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 TIPINQ9BVW5 301 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 NT5C1AQ9BXI3 368 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 LOC100506127A0A0U1RQW1 187 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 FAM153BP0C7A2 387 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 ZNF844Q08AG5 666 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 FAM153CQ494X1 144 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 UGT3A1Q6NUS8 523 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 ZFP1Q6P2D0 407 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 KIAA0408Q6ZU52 694 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 TCP10LQ8TDR4 215 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 RNPEPL1Q9HAU8 725 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 JPH1Q9HDC5 661 aaPredicted RBP15.27■□□□□ 0.03
SCN3B-201ENST00000299333 USP21Q9UK80 565 aa15.27■□□□□ 0.03
SCN3B-201ENST00000299333 ANXA9O76027 345 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 CYP19A1P11511 503 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-201ENST00000299333 SCRN3Q0VDG4 424 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 CSHL1Q14406 222 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 TSNQ15631 228 aaKnown RBP15.26■□□□□ 0.03
SCN3B-201ENST00000299333 PGBD2Q6P3X8 592 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 MACC1Q6ZN28 852 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 EXOC3L1Q86VI1 746 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 ZNF614Q8N883 585 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 TDRD3Q9H7E2 651 aaKnown RBP15.26■□□□□ 0.03
SCN3B-201ENST00000299333 PIN4Q9Y237 131 aaKnown RBP15.26■□□□□ 0.03
SCN3B-201ENST00000299333 LAMC1P11047 1609 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 MAPK1P28482 360 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 MRPS22P82650 360 aaKnown RBP15.26■□□□□ 0.03
SCN3B-201ENST00000299333 C16orf62Q7Z3J2 963 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 CYP4Z2PQ8N1L4 340 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 PRRG3Q9BZD7 231 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 BIRC5O15392 142 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 ME2P23368 584 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 ITGA1P56199 1179 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 USF2Q15853 346 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-201ENST00000299333 SETD9Q8NE22 299 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 ENGASEQ8NFI3 743 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 REREQ9P2R6 1566 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 ZNF806P0C7X5 589 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 STX4Q12846 297 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 VEPH1Q14D04 833 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 SPPL2AQ8TCT8 520 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 C9orf16Q9BUW7 83 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 LMTK3Q96Q04 1460 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 DGAT1O75907 488 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 CD44P16070 742 aaKnown RBP15.26■□□□□ 0.03
SCN3B-201ENST00000299333 PON1P27169 355 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 ITGA9Q13797 1035 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 HLFQ16534 295 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 TFDP3Q5H9I0 405 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 N4BP2L1Q5TBK1 243 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-201ENST00000299333 MRNIPQ6NTE8 343 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 CASP12Q6UXS9 341 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 GET4Q7L5D6 327 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-201ENST00000299333 PLGRKTQ9HBL7 147 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 OSGEPQ9NPF4 335 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 UBA2Q9UBT2 640 aaPredicted RBP15.26■□□□□ 0.03
SCN3B-201ENST00000299333 PRKAG2Q9UGJ0 569 aa15.26■□□□□ 0.03
SCN3B-201ENST00000299333 FAM220BPB1ANY3 271 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 PIK3CDO00329 1044 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 IFNA14P01570 189 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 PROCP04070 461 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 CYBBP04839 570 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 ETS2P15036 469 aa15.25■□□□□ 0.03
SCN3B-201ENST00000299333 IREB2P48200 963 aaKnown RBP15.25■□□□□ 0.03
SCN3B-201ENST00000299333 RUNDC3AQ59EK9 446 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms