RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SLC27A3Q5K4L6 730 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 PAOXQ6QHF9 649 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 THNSL1Q8IYQ7 743 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 TTLL6Q8N841 843 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 SREK1Q8WXA9 508 aaKnown RBP11.8□□□□□ -0.52
TRUB1-201ENST00000298746 PPWD1Q96BP3 646 aaKnown RBP11.8□□□□□ -0.52
TRUB1-201ENST00000298746 DCUN1D1Q96GG9 259 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 WDR83Q9BRX9 315 aaKnown RBP11.8□□□□□ -0.52
TRUB1-201ENST00000298746 FETUBQ9UGM5 382 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 SCAF8Q9UPN6 1271 aaKnown RBP11.8□□□□□ -0.52
TRUB1-201ENST00000298746 SPDYE16A6NNV3 312 aaPredicted RBP11.8□□□□□ -0.52
TRUB1-201ENST00000298746 APOC4-APOC2K7ER74 178 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 APOC2P02655 101 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 WNT7BP56706 349 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 RPS6P62753 249 aaKnown RBP11.8□□□□□ -0.52
TRUB1-201ENST00000298746 WASHC5Q12768 1159 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 DCTN2Q13561 401 aaKnown RBP11.8□□□□□ -0.52
TRUB1-201ENST00000298746 TTLL12Q14166 644 aaPredicted RBP11.8□□□□□ -0.52
TRUB1-201ENST00000298746 NRF1Q16656 503 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 ZNF699Q32M78 642 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 EME1Q96AY2 570 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 CCDC106Q9BWC9 280 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 C20orf27Q9GZN8 174 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 RNPEPQ9H4A4 650 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 ANKEF1Q9NU02 776 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 PTTG2Q9NZH5 202 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 PAK5Q9P286 719 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 DNAJB4Q9UDY4 337 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 USP18Q9UMW8 372 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 PLA2G4CQ9UP65 541 aa11.8□□□□□ -0.52
TRUB1-201ENST00000298746 TDRKHQ9Y2W6 561 aaKnown RBP11.8□□□□□ -0.52
TRUB1-201ENST00000298746 STAMBPO95630 424 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 APOEP02649 317 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 RBL1P28749 1068 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 SERPINB8P50452 374 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 C6orf52Q5T4I8 152 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 TATDN1Q6P1N9 297 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 LRRC8BQ6P9F7 803 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 FAM160B2Q86V87 743 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 MZB1Q8WU39 189 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 TMA16Q96EY4 203 aaKnown RBP11.79□□□□□ -0.52
TRUB1-201ENST00000298746 HAPLN3Q96S86 360 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 RSAD1Q9HA92 442 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 ACSS2Q9NR19 701 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 SEPT10Q9P0V9 454 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 POLIQ9UNA4 740 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 FIS1Q9Y3D6 152 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 PTPRJQ12913 1337 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 GOLGB1Q14789 3259 aaKnown RBP11.79□□□□□ -0.52
TRUB1-201ENST00000298746 DGAT1O75907 488 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 TNFAIP8O95379 198 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 VNN1O95497 513 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 C4BPAP04003 597 aaKnown RBP11.79□□□□□ -0.52
TRUB1-201ENST00000298746 CSH1P0DML2 217 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 CSH2P0DML3 217 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 SFNP31947 248 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 PRAMEP78395 509 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 ANGEL2Q5VTE6 544 aaKnown RBP11.79□□□□□ -0.52
TRUB1-201ENST00000298746 RTKN2Q8IZC4 609 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 PQLC1Q8N2U9 271 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 NLRP7Q8WX94 980 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 CDRT15Q96T59 188 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 SIKE1Q9BRV8 207 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 ZNF341Q9BYN7 854 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 GLIS2Q9BZE0 524 aaPredicted RBP11.79□□□□□ -0.52
TRUB1-201ENST00000298746 CYP26B1Q9NR63 512 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 SMYD2Q9NRG4 433 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 H0YCG3 227 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 BUD23O43709 281 aaKnown RBP11.79□□□□□ -0.52
TRUB1-201ENST00000298746 CCNE2O96020 404 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 CST3P01034 146 aaPredicted RBP11.79□□□□□ -0.52
TRUB1-201ENST00000298746 FAM58BPP0C7Q3 252 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 ACO1P21399 889 aaKnown RBP11.79□□□□□ -0.52
TRUB1-201ENST00000298746 CCNIQ14094 377 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 PDK1Q15118 436 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 TLR1Q15399 786 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 SLC44A4Q53GD3 710 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 DENND1BQ6P3S1 775 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 KYAT3Q6YP21 454 aaKnown RBP11.79□□□□□ -0.52
TRUB1-201ENST00000298746 TMC7Q7Z402 723 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 AMIGO2Q86SJ2 522 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 PRMT6Q96LA8 375 aaPredicted RBP11.79□□□□□ -0.52
TRUB1-201ENST00000298746 ST6GALNAC4Q9H4F1 302 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 SUDS3Q9H7L9 328 aaPredicted RBP11.79□□□□□ -0.52
TRUB1-201ENST00000298746 NRDE2Q9H7Z3 1164 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 ADA2Q9NZK5 511 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 SLC17A6Q9P2U8 582 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 BCAP29Q9UHQ4 241 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 ZNF536O15090 1300 aa11.79□□□□□ -0.52
TRUB1-201ENST00000298746 MAST2Q6P0Q8 1798 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 MAGEB3O15480 346 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 DHX15O43143 795 aaKnown RBP11.78□□□□□ -0.52
TRUB1-201ENST00000298746 PDGFRAP16234 1089 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 RAP1GAPP47736 663 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 YWHAZP63104 245 aaKnown RBP11.78□□□□□ -0.52
TRUB1-201ENST00000298746 MRPS5P82675 430 aaKnown RBP11.78□□□□□ -0.52
TRUB1-201ENST00000298746 MRPS9P82933 396 aaKnown RBP11.78□□□□□ -0.52
TRUB1-201ENST00000298746 HPCAP84074 193 aa11.78□□□□□ -0.52
TRUB1-201ENST00000298746 MSLNQ13421 630 aaPredicted RBP11.78□□□□□ -0.52
TRUB1-201ENST00000298746 SLFN12LQ6IEE8 588 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms