RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 PRRG1O14668 218 aa25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 C1RP00736 705 aa25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 CA8P35219 290 aa25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 RDXP35241 583 aaKnown RBP25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 IRS1P35568 1242 aa25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 PSEN1P49768 467 aa25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 ARSEP51690 589 aa25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 CLUL1Q15846 466 aa25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 SLC13A5Q86YT5 568 aaPredicted RBP25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 SLC7A14Q8TBB6 771 aa25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 DQX1Q8TE96 717 aaKnown RBP25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 RBM41Q96IZ5 413 aaKnown RBP25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 SLITRK1Q96PX8 696 aa25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 PIGVQ9NUD9 493 aa25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 FBXW11Q9UKB1 542 aa25.67■■□□□ 1.7
GTF2A1-201ENST00000298173 CHD9Q3L8U1 2897 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 CHD7Q9P2D1 2997 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 MDM4O15151 490 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 TADA3O75528 432 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 F9P00740 461 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 SPATA31D3P0C874 917 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 CSH1P0DML2 217 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 CSH2P0DML3 217 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 KDELR1P24390 212 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 KLRC2P26717 231 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 COPS2P61201 443 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 DEUP1Q05D60 604 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 GPM6BQ13491 265 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 TAZQ16635 292 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 SPATA31D4Q6ZUB0 917 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 RNF25Q96BH1 459 aaPredicted RBP25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 ACSF2Q96CM8 615 aaPredicted RBP25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 TLR8Q9NR97 1041 aaKnown RBP25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 KLHL11Q9NVR0 708 aa25.66■■□□□ 1.7
GTF2A1-201ENST00000298173 MYO7AQ13402 2215 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 KRT1P04264 644 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 TWF1Q12792 350 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 RAB30Q15771 203 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 ERMARDQ5T6L9 678 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 SNX30Q5VWJ9 437 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 PDE12Q6L8Q7 609 aaKnown RBP25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 MFSD7Q6UXD7 560 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 RSRC2Q7L4I2 434 aaKnown RBP25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 ZDHHC14Q8IZN3 488 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 ADAM32Q8TC27 787 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 FAM71BQ8TC56 605 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 OVCA2Q8WZ82 227 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 TRMT2BQ96GJ1 504 aaKnown RBP25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 NAP1L3Q99457 506 aaPredicted RBP25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 HERPUD2Q9BSE4 406 aa25.65■■□□□ 1.7
GTF2A1-201ENST00000298173 EFCAB8A8MWE9 144 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 PI4K2BG5E9Z4 385 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 PTPN7P35236 360 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 CLCN4P51793 760 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 TERF1P54274 439 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 LONRF2Q1L5Z9 754 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 MSANTD2Q6P1R3 559 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 TAC4Q86UU9 113 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 ZNF276Q8N554 614 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 CCDC185Q8N715 623 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 MICAL1Q8TDZ2 1067 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 SNRNP25Q9BV90 132 aaKnown RBP25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 NKX2-4Q9H2Z4 354 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 SMOC2Q9H3U7 446 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 MSRAQ9UJ68 235 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 MAGED2Q9UNF1 606 aaPredicted RBP25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 NR2E1Q9Y466 385 aa25.64■■□□□ 1.7
GTF2A1-201ENST00000298173 CTIFO43310 598 aaKnown RBP25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 GTF2F1P35269 517 aaKnown RBP eCLIP25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 CDKN2BP42772 138 aa25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 CXCR3P49682 368 aa25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 NME3Q13232 169 aa25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 SPOCD1Q6ZMY3 1216 aa25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 DNAJB7Q7Z6W7 309 aaPredicted RBP25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 FAM131BQ86XD5 332 aa25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 KREMEN2Q8NCW0 462 aa25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 CASP10Q92851 521 aa25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 OSBPL8Q9BZF1 889 aa25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 DDIT4Q9NX09 232 aa25.64■■□□□ 1.69
GTF2A1-201ENST00000298173 TCRBV7S2A1N4TA0A589 114 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 LRRD1A4D1F6 860 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 RALAP11233 206 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 EPHB3P54753 998 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 KLF1Q13351 362 aaPredicted RBP25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 SIX1Q15475 284 aaPredicted RBP25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 PPP2R5EQ16537 467 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 ZFYVE27Q5T4F4 411 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 PSTKQ8IV42 348 aaKnown RBP25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 CCDC50Q8IVM0 306 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 KCTD6Q8NC69 237 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 HSPH1Q92598 858 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 PSMG2Q969U7 264 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 RBM12Q9NTZ6 932 aaKnown RBP25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 FZD10Q9ULW2 581 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 EFR3BQ9Y2G0 817 aa25.63■■□□□ 1.69
GTF2A1-201ENST00000298173 GLUD1P00367 558 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 CD48P09326 243 aa25.62■■□□□ 1.69
GTF2A1-201ENST00000298173 RARGP13631 454 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms