RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 H2AFVQ71UI9 128 aa6.94□□□□□ -1.3
TMC1-201ENST00000297784 ZNF280BQ86YH2 543 aa6.94□□□□□ -1.3
TMC1-201ENST00000297784 BEST2Q8NFU1 509 aa6.94□□□□□ -1.3
TMC1-201ENST00000297784 TRIM43Q96BQ3 446 aaPredicted RBP6.94□□□□□ -1.3
TMC1-201ENST00000297784 RSAD1Q9HA92 442 aa6.94□□□□□ -1.3
TMC1-201ENST00000297784 NMRK1Q9NWW6 199 aa6.94□□□□□ -1.3
TMC1-201ENST00000297784 LNPEPQ9UIQ6 1025 aa6.94□□□□□ -1.3
TMC1-201ENST00000297784 STARD13Q9Y3M8 1113 aa6.94□□□□□ -1.3
TMC1-201ENST00000297784 PCDHGA4Q9Y5G9 962 aa6.94□□□□□ -1.3
TMC1-201ENST00000297784 PHF2O75151 1096 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 TJP3O95049 919 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 EOMESO95936 686 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 CHRNA3P32297 505 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 NDST1P52848 882 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 SF3A3Q12874 501 aaKnown RBP eCLIP6.93□□□□□ -1.3
TMC1-201ENST00000297784 MYBPC3Q14896 1274 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 KPNB1Q14974 876 aaKnown RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 KIAA0319Q5VV43 1072 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 PASD1Q8IV76 773 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 RNF169Q8NCN4 708 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 PHC3Q8NDX5 983 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 SLC35G2Q8TBE7 412 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 ARHGEF2Q92974 986 aaKnown RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 SLC7A6OSQ96CW6 309 aaPredicted RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 NR1H4Q96RI1 486 aaPredicted RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 HAPLN3Q96S86 360 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 PPP1R12CQ9BZL4 782 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 MYLK2Q9H1R3 596 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 GOLPH3Q9H4A6 298 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 DPEP3Q9H4B8 488 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 ACTL7BQ9Y614 415 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 NLRC5Q86WI3 1866 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 CASTOR2A6NHX0 329 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 ATMINO43313 823 aaPredicted RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 ABCB4P21439 1286 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 CACNA2D1P54289 1103 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 NOMO3P69849 1222 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 CENPCQ03188 943 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 SFSWAPQ12872 951 aaKnown RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 CCDC142Q17RM4 750 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 DCAF12L1Q5VU92 463 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 ACAD10Q6JQN1 1059 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 RGS9BPQ6ZS82 235 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 LONP2Q86WA8 852 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 ZNF677Q86XU0 584 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 STKLD1Q8NE28 680 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 UCMAQ8WVF2 138 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 ART4Q93070 314 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 TMEM176AQ96HP8 235 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 TGS1Q96RS0 853 aaKnown RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 NDNQ99608 321 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 TBC1D10AQ9BXI6 508 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 TRIM31Q9BZY9 425 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 CYP3A43Q9HB55 503 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 DNAAF2Q9NVR5 837 aaKnown RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 DDX43Q9NXZ2 648 aaKnown RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 BARX2Q9UMQ3 279 aaPredicted RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 SNX24Q9Y343 169 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 NR2E1Q9Y466 385 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 USH1CQ9Y6N9 552 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 ANKRD62A6NC57 917 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 EIF4E1BA6NMX2 242 aaKnown RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 DCTN3O75935 186 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 PFKMP08237 780 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 TAC1P20366 129 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 GSTT1P30711 240 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 RPL21P46778 160 aaKnown RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 GATMP50440 423 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 ARMC3Q5W041 872 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 PPP1R21Q6ZMI0 780 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 ARHGEF18Q6ZSZ5 1173 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 MON1BQ7L1V2 547 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 VPS36Q86VN1 386 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 LRRC8CQ8TDW0 803 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 DDX23Q9BUQ8 820 aaKnown RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 FTHL17Q9BXU8 183 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 DENND2DQ9H6A0 471 aaPredicted RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 C11orf49Q9H6J7 331 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 SEPT11Q9NVA2 429 aaKnown RBP6.93□□□□□ -1.3
TMC1-201ENST00000297784 HCSTQ9UBK5 93 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 CIDEBQ9UHD4 219 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 LGALS13Q9UHV8 139 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 PCDHGC3Q9UN70 934 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 ATP11BQ9Y2G3 1177 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 TBC1D30Q9Y2I9 924 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 PTPRDP23468 1912 aa6.93□□□□□ -1.3
TMC1-201ENST00000297784 SMIM23A6NLE4 172 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 SMAPO00193 183 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 GABRDO14764 452 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 THAP12O43422 761 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 TMEM253P0C7T8 217 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 T-ENOLP0DO92 83 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 EN2P19622 333 aaPredicted RBP6.92□□□□□ -1.3
TMC1-201ENST00000297784 CTNNA2P26232 953 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 CDH5P33151 784 aaPredicted RBP6.92□□□□□ -1.3
TMC1-201ENST00000297784 BPIFB4P59827 614 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 DSC1Q08554 894 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 LSAMPQ13449 338 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 LRRC14Q15048 493 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 C1QTNF12Q5T7M4 302 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms