RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 DENND6AQ8IWF6 608 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 AMER2Q8N7J2 671 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 MCFD2Q8NI22 146 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 PCDHB16Q9NRJ7 776 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 TRMT13Q9NUP7 481 aaKnown RBP12.08□□□□□ -0.48
SNIP1-201ENST00000296215 EHD3Q9NZN3 535 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 METTL21EPA6NDL7 271 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 RNF103O00237 685 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 CBX5P45973 191 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 ILF2Q12905 390 aaKnown RBP12.08□□□□□ -0.48
SNIP1-201ENST00000296215 PPP2R5DQ14738 602 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 ZNF804AQ7Z570 1209 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 RNF148Q8N7C7 305 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 DTX3Q8N9I9 347 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 OR5H6Q8NGV6 325 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 PEX13Q92968 403 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 ARHGEF26Q96DR7 871 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 STN1Q9H668 368 aaKnown RBP12.08□□□□□ -0.48
SNIP1-201ENST00000296215 SYTL2Q9HCH5 934 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 WDR7Q9Y4E6 1490 aa12.08□□□□□ -0.48
SNIP1-201ENST00000296215 GRM8O00222 908 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 TOR1BO14657 336 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 TBX1O43435 398 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 CCNE2O96020 404 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 MSH3P20585 1137 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 TRIM32Q13049 653 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 QPRTQ15274 297 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 SSX2Q16385 188 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 BSPRYQ5W0U4 402 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 TTBK2Q6IQ55 1244 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 ZNF598Q86UK7 904 aaKnown RBP12.07□□□□□ -0.48
SNIP1-201ENST00000296215 GALNT11Q8NCW6 608 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 MNTQ99583 582 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 ZC3H7BQ9UGR2 993 aaKnown RBP12.07□□□□□ -0.48
SNIP1-201ENST00000296215 PPP1R3GB7ZBB8 358 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 GH1P01241 217 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 ANXA1P04083 346 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 ZNF23P17027 643 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 RAP1GAPP47736 663 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 GABPAQ06546 454 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 TFCP2Q12800 502 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 EPS8Q12929 822 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 PDZK1Q5T2W1 519 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 ALG1LQ6GMV1 187 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 OTOAQ7RTW8 1153 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 CMTR1Q8N1G2 835 aaKnown RBP12.07□□□□□ -0.48
SNIP1-201ENST00000296215 CADM2Q8N3J6 435 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 PRICKLE1Q96MT3 831 aaPredicted RBP12.07□□□□□ -0.48
SNIP1-201ENST00000296215 SMYD2Q9NRG4 433 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 PPM1HQ9ULR3 514 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 BIVM-ERCC5R4GMW8 1640 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 CTTNBP2Q8WZ74 1663 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 PTGES3LE9PB15 166 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 NEMP1O14524 444 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 CYP2D6P10635 497 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 PTENP60484 403 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 CDK18Q07002 472 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 SLC39A6Q13433 755 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 MTMR2Q13614 643 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 ZNF568Q3ZCX4 644 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 GALNTL6Q49A17 601 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 SFT2D3Q587I9 215 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 IL23RQ5VWK5 629 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 SPOPLQ6IQ16 392 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 ZNF662Q6ZS27 426 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 LZTR1Q8N653 840 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 CCNYL1Q8N7R7 359 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 KYQ8NBH2 561 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 SLAIN1Q8ND83 568 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 SNX19Q92543 992 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 TCF12Q99081 682 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 TM9SF2Q99805 663 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 MYD88Q99836 296 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 CTRCQ99895 268 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 FAM118BQ9BPY3 351 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 IDI2Q9BXS1 227 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 RDH8Q9NYR8 311 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 SFMBT1Q9UHJ3 866 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 EHBP1L1Q8N3D4 1523 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 WDR19Q8NEZ3 1342 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 TEX51A0A1B0GUA7 166 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 RCCD1A6NED2 376 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 C2orf74A8MZ97 194 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 ECDO95905 644 aaPredicted RBP12.07□□□□□ -0.48
SNIP1-201ENST00000296215 COL6A2P12110 1019 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 ME2P23368 584 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 SERPINB5P36952 375 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 NPEPPSP55786 919 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 PSMC6P62333 389 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 GPS1Q13098 491 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 DGKDQ16760 1214 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 HES5Q5TA89 166 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 ERAP2Q6P179 960 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 PPP4R3CPQ6ZMV5 832 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 RTL3Q8N8U3 475 aaKnown RBP12.07□□□□□ -0.48
SNIP1-201ENST00000296215 EAF2Q96CJ1 260 aaPredicted RBP12.07□□□□□ -0.48
SNIP1-201ENST00000296215 CEP170P1Q96L14 293 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 GAL3ST1Q99999 423 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 PRRG3Q9BZD7 231 aa12.07□□□□□ -0.48
SNIP1-201ENST00000296215 USP44Q9H0E7 712 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms