RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ASTE1Q2TB18 679 aaPredicted RBP13.86□□□□□ -0.19
HPS3-201ENST00000296051 KBTBD12Q3ZCT8 623 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 IQSEC1Q6DN90 963 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 ANGPTL8Q6UXH0 198 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 TMPRSS6Q8IU80 811 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 LRRC15Q8TF66 581 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 FBXO32Q969P5 355 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 PCDHB18PQ96TA0 734 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 RNF19AQ9NV58 838 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 SLC24A2Q9UI40 661 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 MBL2P11226 248 aaPredicted RBP13.86□□□□□ -0.19
HPS3-201ENST00000296051 VCPP55072 806 aaKnown RBP13.86□□□□□ -0.19
HPS3-201ENST00000296051 BNIP1Q12981 228 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 EFHC1Q5JVL4 640 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 POLNQ7Z5Q5 900 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 ULK4Q96C45 1275 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 PAK5Q9P286 719 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 CORO1CQ9ULV4 474 aaPredicted RBP13.86□□□□□ -0.19
HPS3-201ENST00000296051 TBC1D12O60347 775 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 USP1O94782 785 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 ENDOD1O94919 500 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 ESRRBO95718 433 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 NAMPTP43490 491 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 ITPRIPL1Q6GPH6 555 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 ARHGAP22Q7Z5H3 698 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 CDKL3Q8IVW4 592 aaPredicted RBP13.86□□□□□ -0.19
HPS3-201ENST00000296051 ZNF669Q96BR6 464 aaPredicted RBP13.86□□□□□ -0.19
HPS3-201ENST00000296051 APOL2Q9BQE5 337 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 FAM96AQ9H5X1 160 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 NMRK1Q9NWW6 199 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 TAGLN3Q9UI15 199 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 MYH8P13535 1937 aa13.86□□□□□ -0.19
HPS3-201ENST00000296051 SPATA31C1P0DKV0 1188 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 AKT1P31749 480 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 PTK6Q13882 451 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 CATSPERGQ6ZRH7 1159 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 RPRD1AQ96P16 312 aaPredicted RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 PGLYRP2Q96PD5 576 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 HTATIP2Q9BUP3 242 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 CIPCQ9C0C6 399 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ATP6V1C1P21283 382 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ETFBP38117 255 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 RHBDL3P58872 404 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 LAMTOR4Q0VGL1 99 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 SPRED3Q2MJR0 410 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 MPZL3Q6UWV2 235 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 C1orf186Q6ZWK4 172 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 RASGEF1CQ8N431 466 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ZNF606Q8WXB4 792 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 DCUN1D1Q96GG9 259 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ADAM2Q99965 735 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 DENND2DQ9H6A0 471 aaPredicted RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 AGO4Q9HCK5 861 aaKnown RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 DDIT4Q9NX09 232 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 SNTG2Q9NY99 539 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 SLC39A10Q9ULF5 831 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 PTPRZ1P23471 2315 aaPredicted RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 SP100P23497 879 aaPredicted RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 FMO1Q01740 532 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 YWHAHQ04917 246 aaPredicted RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 IKBKEQ14164 716 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 SLC1A5Q15758 541 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 GOLGA7BQ2TAP0 167 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ZBTB41Q5SVQ8 909 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 RNF43Q68DV7 783 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ZBTB46Q86UZ6 589 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 SLC26A11Q86WA9 606 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 CYGBQ8WWM9 190 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 TLCD1Q96CP7 247 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ZBTB45Q96K62 511 aaPredicted RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 CLPTM1LQ96KA5 538 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 RSAD1Q9HA92 442 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ETAA1Q9NY74 926 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ARHGAP23Q9P227 1491 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 H0Y626 953 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 H7C4K7 107 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 SNX2O60749 519 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 RPL7AP62424 266 aaKnown RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 TAP1Q03518 808 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ARHGEF7Q14155 803 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 USP10Q14694 798 aaKnown RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 FASTKD3Q14CZ7 662 aaKnown RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 OASLQ15646 514 aaKnown RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 TRMT5Q32P41 509 aaKnown RBP13.85□□□□□ -0.19
HPS3-201ENST00000296051 SLC45A4Q5BKX6 768 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 FAM171A1Q5VUB5 890 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 GPR142Q7Z601 462 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 CYP4X1Q8N118 509 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.19
HPS3-201ENST00000296051 MECRQ9BV79 373 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ARL8BQ9NVJ2 186 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 TRPM5Q9NZQ8 1165 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 STARD13Q9Y3M8 1113 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 ZNF541Q9H0D2 1346 aa13.85□□□□□ -0.19
HPS3-201ENST00000296051 MEIS2O14770 477 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 DCXO43602 365 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 TFE3P19532 575 aaPredicted RBP13.84□□□□□ -0.19
HPS3-201ENST00000296051 ABCG1P45844 678 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 RAP1GAPP47736 663 aa13.84□□□□□ -0.19
HPS3-201ENST00000296051 FKBP1BP68106 108 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms