RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PPP6R3Q5H9R7 873 aaPredicted RBP23.79■■□□□ 1.4
PTX3-201ENST00000295927 BSPRYQ5W0U4 402 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 ANKS3Q6ZW76 656 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 VSIG1Q86XK7 387 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 ATAD1Q8NBU5 361 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 SLC35B2Q8TB61 432 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 ACTL9Q8TC94 416 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 EDEM1Q92611 657 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 MAGEB5Q9BZ81 275 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 DRG1Q9Y295 367 aaKnown RBP23.79■■□□□ 1.4
PTX3-201ENST00000295927 NEU2Q9Y3R4 380 aa23.79■■□□□ 1.4
PTX3-201ENST00000295927 CPB1P15086 417 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 MAGEA11P43364 429 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 TFDP2Q14188 446 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 OASLQ15646 514 aaKnown RBP23.78■■□□□ 1.4
PTX3-201ENST00000295927 ANKRD20A8PQ5CZ79 823 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 ADAM32Q8TC27 787 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 NKD2Q969F2 451 aaPredicted RBP23.78■■□□□ 1.4
PTX3-201ENST00000295927 IGSF21Q96ID5 467 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 C8orf48Q96LL4 319 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 ZNF670Q9BS34 389 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 FRMD8P1Q9BZ68 369 aaPredicted RBP23.78■■□□□ 1.4
PTX3-201ENST00000295927 PIGVQ9NUD9 493 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 ZDHHC18Q9NUE0 388 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 MTMR10Q9NXD2 777 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 RRN3Q9NYV6 651 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 FZD10Q9ULW2 581 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 ZNF148Q9UQR1 794 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 APOC4-APOC2K7ER74 178 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 EFCAB14O75071 495 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 APOC2P02655 101 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 GPR15P49685 360 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 LMNB2Q03252 620 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 GPR17Q13304 367 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 TRIP13Q15645 432 aaPredicted RBP23.78■■□□□ 1.4
PTX3-201ENST00000295927 DDR2Q16832 855 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 SPOUT1Q5T280 376 aaKnown RBP23.78■■□□□ 1.4
PTX3-201ENST00000295927 PRSS55Q6UWB4 352 aaPredicted RBP23.78■■□□□ 1.4
PTX3-201ENST00000295927 TTC9BQ8N6N2 239 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 KCTD15Q96SI1 283 aaPredicted RBP23.78■■□□□ 1.4
PTX3-201ENST00000295927 VN1R3Q9BXE9 311 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 RC3H2Q9HBD1 1191 aaKnown RBP23.78■■□□□ 1.4
PTX3-201ENST00000295927 ASIC3Q9UHC3 531 aa23.78■■□□□ 1.4
PTX3-201ENST00000295927 ZNF487B1APH4 448 aa23.77■■□□□ 1.4
PTX3-201ENST00000295927 TRIM66O15016 1216 aa23.77■■□□□ 1.4
PTX3-201ENST00000295927 PECAM1P16284 738 aaPredicted RBP23.77■■□□□ 1.4
PTX3-201ENST00000295927 SDHAF4Q5VUM1 108 aa23.77■■□□□ 1.4
PTX3-201ENST00000295927 KCNT2Q6UVM3 1135 aa23.77■■□□□ 1.4
PTX3-201ENST00000295927 ZDHHC24Q6UX98 284 aa23.77■■□□□ 1.4
PTX3-201ENST00000295927 GSTA5Q7RTV2 222 aa23.77■■□□□ 1.4
PTX3-201ENST00000295927 PCDH19Q8TAB3 1148 aa23.77■■□□□ 1.4
PTX3-201ENST00000295927 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.77■■□□□ 1.4
PTX3-201ENST00000295927 FAF2Q96CS3 445 aa23.77■■□□□ 1.4
PTX3-201ENST00000295927 PGAP3Q96FM1 320 aaPredicted RBP23.77■■□□□ 1.4
PTX3-201ENST00000295927 VIPAS39Q9H9C1 493 aa23.77■■□□□ 1.4
PTX3-201ENST00000295927 HPCAL4Q9UM19 191 aa23.77■■□□□ 1.4
PTX3-201ENST00000295927 PTPRSQ13332 1948 aa23.77■■□□□ 1.4
PTX3-201ENST00000295927 GBP1P32455 592 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 PLTPP55058 493 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 USP41Q3LFD5 358 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 ZNF365Q70YC5 407 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 PSTKQ8IV42 348 aaKnown RBP23.76■■□□□ 1.39
PTX3-201ENST00000295927 PQLC3Q8N755 202 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 OXCT2Q9BYC2 517 aaPredicted RBP23.76■■□□□ 1.39
PTX3-201ENST00000295927 MTMR11A4FU01 709 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 ITGAVP06756 1048 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 NPNTQ6UXI9 565 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 RNF19BQ6ZMZ0 732 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 RNF168Q8IYW5 571 aaPredicted RBP23.76■■□□□ 1.39
PTX3-201ENST00000295927 NUP93Q8N1F7 819 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 PYROXD2Q8N2H3 581 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 ALLCQ8N6M5 410 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 TSEN2Q8NCE0 465 aaKnown RBP23.76■■□□□ 1.39
PTX3-201ENST00000295927 STKLD1Q8NE28 680 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 TRIM62Q9BVG3 475 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 WDR6Q9NNW5 1121 aaKnown RBP23.76■■□□□ 1.39
PTX3-201ENST00000295927 TMPRSS4Q9NRS4 437 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 DDIT4Q9NX09 232 aa23.76■■□□□ 1.39
PTX3-201ENST00000295927 SPDYE4A6NLX3 237 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 VNN2O95498 520 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 KRT14P02533 472 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 IVDP26440 423 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 YWHAGP61981 247 aaKnown RBP eCLIP23.75■■□□□ 1.39
PTX3-201ENST00000295927 BEND5Q7L4P6 421 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 FBXO25Q8TCJ0 367 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 SPPL2BQ8TCT7 592 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 RIN2Q8WYP3 895 aaPredicted RBP23.75■■□□□ 1.39
PTX3-201ENST00000295927 SLC9A7Q96T83 725 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 FMO2Q99518 471 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 FAM204AQ9H8W3 233 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 IL23AQ9NPF7 189 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 OGFRQ9NZT2 677 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 PLXNA3P51805 1871 aa23.75■■□□□ 1.39
PTX3-201ENST00000295927 ZNF638Q14966 1978 aaKnown RBP23.75■■□□□ 1.39
PTX3-201ENST00000295927 APOL1O14791 398 aa23.74■■□□□ 1.39
PTX3-201ENST00000295927 BAIAP3O94812 1187 aa23.74■■□□□ 1.39
PTX3-201ENST00000295927 EN2P19622 333 aaPredicted RBP23.74■■□□□ 1.39
PTX3-201ENST00000295927 KLRC2P26717 231 aa23.74■■□□□ 1.39
PTX3-201ENST00000295927 SMARCB1Q12824 385 aa23.74■■□□□ 1.39
PTX3-201ENST00000295927 BTG3Q14201 252 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms