RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 NEDD8Q15843 81 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 DNAJC24Q6P3W2 148 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 PCGF5Q86SE9 256 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 SNX32Q86XE0 403 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 RELL1Q8IUW5 271 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 RCOR2Q8IZ40 523 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 DEPDC1BQ8WUY9 529 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 SLITRK1Q96PX8 696 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 PKP2Q99959 881 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 LXNQ9BS40 222 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 EIF2AQ9BY44 585 aaKnown RBP10.53□□□□□ -0.72
CLDN1-201ENST00000295522 RNPEPQ9H4A4 650 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 GID8Q9NWU2 228 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 PLLPQ9Y342 182 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 FIS1Q9Y3D6 152 aa10.53□□□□□ -0.72
CLDN1-201ENST00000295522 CNTNAP2Q9UHC6 1331 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 GOLGB1Q14789 3259 aaKnown RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 CXorf49A8MYA2 514 aaPredicted RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 KRT38O76015 456 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 PTPN1P18031 435 aaKnown RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 XRCC1P18887 633 aaPredicted RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 EEF1B2P24534 225 aaKnown RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 MAP4P27816 1152 aaKnown RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 SOX11P35716 441 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 PPARGP37231 505 aaPredicted RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 SPIRE1Q08AE8 756 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 NME3Q13232 169 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 CYP2A13Q16696 494 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 BRDTQ58F21 947 aaPredicted RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 ZNF362Q5T0B9 420 aaPredicted RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 METTL21CQ5VZV1 264 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 POTEAQ6S8J7 498 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 KRT27Q7Z3Y8 459 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 ADGRG6Q86SQ4 1221 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 KATNAL2Q8IYT4 538 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 FAM47BQ8NA70 645 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 ATP6V0A1Q93050 837 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 C12orf43Q96C57 262 aaKnown RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 PLEKHA8Q96JA3 519 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 C7orf26Q96N11 449 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 NACC1Q96RE7 527 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 GCOM2Q9BZD3 368 aaPredicted RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 RBM38Q9H0Z9 239 aaKnown RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 PIH1D1Q9NWS0 290 aaKnown RBP10.52□□□□□ -0.72
CLDN1-201ENST00000295522 TMEM98Q9Y2Y6 226 aa10.52□□□□□ -0.72
CLDN1-201ENST00000295522 ZNF536O15090 1300 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 COL5A2P05997 1499 aaPredicted RBP10.52□□□□□ -0.73
CLDN1-201ENST00000295522 TESPA1A2RU30 521 aaPredicted RBP10.52□□□□□ -0.73
CLDN1-201ENST00000295522 WDR46O15213 610 aaKnown RBP10.52□□□□□ -0.73
CLDN1-201ENST00000295522 CCNT2O60583 730 aaKnown RBP10.52□□□□□ -0.73
CLDN1-201ENST00000295522 GMNNO75496 209 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 HSPA4LO95757 839 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 FUCA1P04066 466 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 COX4I1P13073 169 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 NR4A1P22736 598 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 SMARCA1P28370 1054 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 DSG3P32926 999 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 GMPRP36959 345 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 NDST2P52849 883 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 PPM1LQ5SGD2 360 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 CYP4A22Q5TCH4 519 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 TTC33Q6PID6 262 aaPredicted RBP10.52□□□□□ -0.73
CLDN1-201ENST00000295522 CYP2R1Q6VVX0 501 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 UNC45BQ8IWX7 931 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 SIX5Q8N196 739 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 CIB1Q99828 191 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 SSU72Q9NP77 194 aaKnown RBP10.52□□□□□ -0.73
CLDN1-201ENST00000295522 THAP1Q9NVV9 213 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 DAPK2Q9UIK4 370 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 RAB26Q9ULW5 256 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 MAGED2Q9UNF1 606 aaPredicted RBP10.52□□□□□ -0.73
CLDN1-201ENST00000295522 TMED5Q9Y3A6 229 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 KCPQ6ZWJ8 1503 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 ATRNL1Q5VV63 1379 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 BTBD19C9JJ37 291 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 GNA15P30679 374 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 RCVRNP35243 200 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 CDK9P50750 372 aaKnown RBP10.52□□□□□ -0.73
CLDN1-201ENST00000295522 THOP1P52888 689 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 TCP10Q12799 353 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 ZBTB17Q13105 803 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 MAMLD1Q13495 774 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 MFSD14BQ5SR56 506 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 OGFRL1Q5TC84 451 aaPredicted RBP10.52□□□□□ -0.73
CLDN1-201ENST00000295522 CES4AQ5XG92 561 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 HAUS6Q7Z4H7 955 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 TMCO5AQ8N6Q1 288 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 VTI1AQ96AJ9 217 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 TRIM11Q96F44 468 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 C6orf203Q9P0P8 240 aaPredicted RBP10.52□□□□□ -0.73
CLDN1-201ENST00000295522 SSX2IPQ9Y2D8 614 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 DCCP43146 1447 aa10.52□□□□□ -0.73
CLDN1-201ENST00000295522 SDR42E2A6NKP2 422 aa10.51□□□□□ -0.73
CLDN1-201ENST00000295522 SAT1P21673 171 aa10.51□□□□□ -0.73
CLDN1-201ENST00000295522 PHKA2P46019 1235 aa10.51□□□□□ -0.73
CLDN1-201ENST00000295522 TFDP3Q5H9I0 405 aa10.51□□□□□ -0.73
CLDN1-201ENST00000295522 TPTE2Q6XPS3 522 aa10.51□□□□□ -0.73
CLDN1-201ENST00000295522 FBXO11Q86XK2 927 aa10.51□□□□□ -0.73
CLDN1-201ENST00000295522 CATSPER1Q8NEC5 780 aa10.51□□□□□ -0.73
CLDN1-201ENST00000295522 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms