RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ANGEL2Q5VTE6 544 aaKnown RBP15.23■□□□□ 0.03
CCNF-201ENST00000293968 PRAMEF18Q5VWM3 479 aa15.23■□□□□ 0.03
CCNF-201ENST00000293968 ZBTB8OSQ8IWT0 167 aa15.23■□□□□ 0.03
CCNF-201ENST00000293968 CDHR1Q96JP9 859 aa15.23■□□□□ 0.03
CCNF-201ENST00000293968 CLMNQ96JQ2 1002 aa15.23■□□□□ 0.03
CCNF-201ENST00000293968 GCNAQ96QF7 691 aa15.23■□□□□ 0.03
CCNF-201ENST00000293968 PEBP4Q96S96 227 aa15.23■□□□□ 0.03
CCNF-201ENST00000293968 FRMD8P1Q9BZ68 369 aaPredicted RBP15.23■□□□□ 0.03
CCNF-201ENST00000293968 MIS12Q9H081 205 aa15.23■□□□□ 0.03
CCNF-201ENST00000293968 BPGMP07738 259 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 SERPINA6P08185 405 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 GPD1P21695 349 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 ABCD1P33897 745 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 GMPRP36959 345 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 SLC1A6P48664 564 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 CES4AQ5XG92 561 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 ARHGAP22Q7Z5H3 698 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 ARHGAP18Q8N392 663 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 NIPA2Q8N8Q9 360 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 NDNQ99608 321 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 CEP41Q9BYV8 373 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 KLHL4Q9C0H6 718 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 S100A14Q9HCY8 104 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 MAN1C1Q9NR34 630 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 NRBP2Q9NSY0 501 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 ETNK2Q9NVF9 386 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 THAP1Q9NVV9 213 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 SP2Q02086 613 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 KCNJ11Q14654 390 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 NOMO1Q15155 1222 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 SFT2D3Q587I9 215 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 MYLK4Q86YV6 388 aaPredicted RBP15.22■□□□□ 0.03
CCNF-201ENST00000293968 HPS6Q86YV9 775 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 EPAS1Q99814 870 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 ACSS2Q9NR19 701 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 CNTN3Q9P232 1028 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 TCRBV5S1A1TA0A578 114 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 KLHL33A6NCF5 533 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 CAPN14A8MX76 684 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 E9PBE3 544 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 CHADO15335 359 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 KLHL41O60662 606 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 RFPL1O75677 317 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 MICAL2O94851 1124 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 GJB1P08034 283 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 F7P08709 466 aaPredicted RBP15.22■□□□□ 0.03
CCNF-201ENST00000293968 ATP6V1B1P15313 513 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 SAT1P21673 171 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 HSF5Q4G112 596 aaPredicted RBP15.22■□□□□ 0.03
CCNF-201ENST00000293968 MARK2Q7KZI7 788 aaKnown RBP15.22■□□□□ 0.03
CCNF-201ENST00000293968 SPATA16Q9BXB7 569 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 PDLIM7Q9NR12 457 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 EP400Q96L91 3159 aa15.22■□□□□ 0.03
CCNF-201ENST00000293968 ADCY3O60266 1144 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 FKBP6O75344 327 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 TRPA1O75762 1119 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 CXCL8P10145 99 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 DPY19L2Q6NUT2 758 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 CES3Q6UWW8 571 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 NME8Q8N427 588 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 ICA1LQ8NDH6 482 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 OLFM3Q96PB7 478 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 CNTN6Q9UQ52 1028 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 SIPA1L1O43166 1804 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 SYNJ2BP-COX16A0A087WUM0 186 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 DCXO43602 365 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 PEX10O60683 326 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 APBA3O96018 575 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 MSX2P35548 267 aaPredicted RBP15.21■□□□□ 0.03
CCNF-201ENST00000293968 CCNFP41002 786 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 MAP7Q14244 749 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 PGBD4Q96DM1 585 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 DHX35Q9H5Z1 703 aaKnown RBP15.21■□□□□ 0.03
CCNF-201ENST00000293968 POPDC2Q9HBU9 364 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 COX16Q9P0S2 106 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 EFR3BQ9Y2G0 817 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 WDR27A2RRH5 827 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 NEMP1O14524 444 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 AIM2O14862 343 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 OGTO15294 1046 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 MAFGO15525 162 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 CREB3O43889 395 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 DGKIO75912 1065 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 ITGB3P05106 788 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 CDK7P50613 346 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 BTKQ06187 659 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 DLG1Q12959 904 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 FAM47CQ5HY64 1035 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 SATL1Q86VE3 508 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 PIWIL2Q8TC59 973 aaKnown RBP15.21■□□□□ 0.03
CCNF-201ENST00000293968 TWNKQ96RR1 684 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 CCDC106Q9BWC9 280 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 DEFB129Q9H1M3 183 aa15.21■□□□□ 0.03
CCNF-201ENST00000293968 ASPAP45381 313 aa15.21■□□□□ 0.02
CCNF-201ENST00000293968 AP3M2P53677 418 aa15.21■□□□□ 0.02
CCNF-201ENST00000293968 PTPN11Q06124 597 aaPredicted RBP15.21■□□□□ 0.02
CCNF-201ENST00000293968 PDCD2Q16342 344 aaPredicted RBP15.21■□□□□ 0.02
CCNF-201ENST00000293968 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.21■□□□□ 0.02
CCNF-201ENST00000293968 GSDMBQ8TAX9 411 aa15.21■□□□□ 0.02
CCNF-201ENST00000293968 EZH1Q92800 747 aaPredicted RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms