RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 TRIM11Q96F44 468 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 ZFRQ96KR1 1074 aaKnown RBP13.84□□□□□ -0.19
CCDC42-201ENST00000293845 ZFP14Q9HCL3 533 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 IGSF9Q9P2J2 1179 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 DNMT3LQ9UJW3 386 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 NUDT5Q9UKK9 219 aa13.84□□□□□ -0.19
CCDC42-201ENST00000293845 GOLGA8SH3BPF8 625 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 LCA5LO95447 670 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 TBX18O95935 607 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 NCAM1P13591 858 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 RRM1P23921 792 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 ZXDBP98169 803 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 USP4Q13107 963 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 CCDC122Q5T0U0 273 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 PLEKHA7Q6IQ23 1121 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 PARM1Q6UWI2 310 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 DDX42Q86XP3 938 aaKnown RBP eCLIP13.83□□□□□ -0.19
CCDC42-201ENST00000293845 DEFB106AQ8N104 65 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 KIAA1958Q8N8K9 716 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 ANP32BQ92688 251 aaKnown RBP13.83□□□□□ -0.19
CCDC42-201ENST00000293845 RSPRY1Q96DX4 576 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 PDLIM2Q96JY6 352 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 KLF16Q9BXK1 252 aaPredicted RBP13.83□□□□□ -0.19
CCDC42-201ENST00000293845 NACA2Q9H009 215 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 SMG9Q9H0W8 520 aaKnown RBP13.83□□□□□ -0.19
CCDC42-201ENST00000293845 SMOC2Q9H3U7 446 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 NAALADL1Q9UQQ1 740 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 CCL26Q9Y258 94 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 CPQQ9Y646 472 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 NUMBLQ9Y6R0 609 aa13.83□□□□□ -0.19
CCDC42-201ENST00000293845 ANKRD62A6NC57 917 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 SIGLEC16A6NMB1 481 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 CAPN9O14815 690 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 MDM4O15151 490 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 GRAP2O75791 330 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 SLC34A2O95436 690 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 IGLV3-25P01717 112 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 NOS2P35228 1153 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 FLT3P36888 993 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 VIPR2P41587 438 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 MATKP42679 507 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 EFEMP1Q12805 493 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 NNTQ13423 1086 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 ZNF77Q15935 545 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 PPP1R15BQ5SWA1 713 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 SYPL2Q5VXT5 272 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 TANGO2Q6ICL3 276 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 VITQ6UXI7 678 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 DNAAF5Q86Y56 855 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 RIN3Q8TB24 985 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 ADAMTS19Q8TE59 1207 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 DQX1Q8TE96 717 aaKnown RBP13.83□□□□□ -0.2
CCDC42-201ENST00000293845 DEPDC1BQ8WUY9 529 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 ZNF653Q96CK0 615 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 BAG1Q99933 345 aaPredicted RBP13.83□□□□□ -0.2
CCDC42-201ENST00000293845 SELENOOQ9BVL4 669 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 KCNK12Q9HB15 430 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 METTL5Q9NRN9 209 aaKnown RBP13.83□□□□□ -0.2
CCDC42-201ENST00000293845 SPTLC3Q9NUV7 552 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 RRN3Q9NYV6 651 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 MARCH2Q9P0N8 246 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 LIMD1Q9UGP4 676 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 RASAL2Q9UJF2 1139 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 STAP1Q9ULZ2 295 aa13.83□□□□□ -0.2
CCDC42-201ENST00000293845 HBS1LQ9Y450 684 aaKnown RBP13.83□□□□□ -0.2
CCDC42-201ENST00000293845 COL4A2P08572 1712 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 SOWAHDA6NJG2 315 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 HEPACAM2A8MVW5 462 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 LEFTY2O00292 366 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 DPYSL4O14531 572 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 ZNF263O14978 683 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 KRT3P12035 628 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 CYLC1P35663 651 aaPredicted RBP13.82□□□□□ -0.2
CCDC42-201ENST00000293845 GALCP54803 685 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 COG7P83436 770 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 FCHO2Q0JRZ9 810 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 EIF4EBP2Q13542 120 aaPredicted RBP13.82□□□□□ -0.2
CCDC42-201ENST00000293845 DCAF6Q58WW2 860 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 C10orf76Q5T2E6 689 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 TRNP1Q6NT89 227 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 DNAJC24Q6P3W2 148 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 MIB1Q86YT6 1006 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 MFSD6LQ8IWD5 586 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 BPIFB1Q8TDL5 484 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 SH3RF2Q8TEC5 729 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 NT5C3BQ969T7 300 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 SERPINB11Q96P15 392 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 LRRC3BQ96PB8 259 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 NPY6RQ99463 290 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 KXD1Q9BQD3 176 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 DDX23Q9BUQ8 820 aaKnown RBP13.82□□□□□ -0.2
CCDC42-201ENST00000293845 PARVAQ9NVD7 372 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 SMPD4Q9NXE4 827 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC42-201ENST00000293845 CNOT8Q9UFF9 292 aaKnown RBP13.82□□□□□ -0.2
CCDC42-201ENST00000293845 SFMBT1Q9UHJ3 866 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 SCINQ9Y6U3 715 aa13.82□□□□□ -0.2
CCDC42-201ENST00000293845 C2CD4BA6NLJ0 364 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 EIF3CLB5ME19 914 aaKnown RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 IRAK2O43187 625 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms