RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 LRRC27Q9C0I9 530 aa9.31□□□□□ -0.92
TFF1-201ENST00000291527 DNAJC17Q9NVM6 304 aaKnown RBP9.31□□□□□ -0.92
TFF1-201ENST00000291527 CACNA2D2Q9NY47 1150 aa9.31□□□□□ -0.92
TFF1-201ENST00000291527 CALCOCO1Q9P1Z2 691 aa9.31□□□□□ -0.92
TFF1-201ENST00000291527 PILRBQ9UKJ0 227 aa9.31□□□□□ -0.92
TFF1-201ENST00000291527 SH3BP1Q9Y3L3 701 aa9.31□□□□□ -0.92
TFF1-201ENST00000291527 SLCO1B1Q9Y6L6 691 aa9.31□□□□□ -0.92
TFF1-201ENST00000291527 PTPRBP23467 1997 aa9.31□□□□□ -0.92
TFF1-201ENST00000291527 IGHV1OR15-9A0A0B4J2B8 117 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 SLC9A3R1O14745 358 aaPredicted RBP9.3□□□□□ -0.92
TFF1-201ENST00000291527 CLSTN1O94985 981 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 ADH1CP00326 375 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 RPN1P04843 607 aaKnown RBP9.3□□□□□ -0.92
TFF1-201ENST00000291527 HMBSP08397 361 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 RARGP13631 454 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 TYRP14679 529 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 ENGP17813 658 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 ACO1P21399 889 aaKnown RBP9.3□□□□□ -0.92
TFF1-201ENST00000291527 DEKP35659 375 aaKnown RBP9.3□□□□□ -0.92
TFF1-201ENST00000291527 PDE6CP51160 858 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 VAMP7P51809 220 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 SNRPFP62306 86 aaKnown RBP9.3□□□□□ -0.92
TFF1-201ENST00000291527 SGSM1Q2NKQ1 1148 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 Q6ZNB5 142 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 BHLHA9Q7RTU4 235 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 TMC2Q8TDI7 906 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 SORCS1Q8WY21 1168 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 OVCA2Q8WZ82 227 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 CYFIP2Q96F07 1278 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 GDPD2Q9HCC8 539 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 TMEM9BQ9NQ34 198 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 EXOC1Q9NV70 894 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.3□□□□□ -0.92
TFF1-201ENST00000291527 FAM13BQ9NYF5 915 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 BCCIPQ9P287 314 aaKnown RBP eCLIP9.3□□□□□ -0.92
TFF1-201ENST00000291527 CYP8B1Q9UNU6 501 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 SCML2Q9UQR0 700 aa9.3□□□□□ -0.92
TFF1-201ENST00000291527 TP53BP1Q12888 1972 aaPredicted RBP9.3□□□□□ -0.92
TFF1-201ENST00000291527 GOLGA4Q13439 2230 aaKnown RBP9.29□□□□□ -0.92
TFF1-201ENST00000291527 KCNJ18B7U540 433 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 PDXKO00764 312 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 MAP3K13O43283 966 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 HYAL3O43820 417 aaPredicted RBP9.29□□□□□ -0.92
TFF1-201ENST00000291527 CILPO75339 1184 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 GABBR2O75899 941 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 STC2O76061 302 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 HOXB2P14652 356 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 EIF2DP41214 584 aaKnown RBP9.29□□□□□ -0.92
TFF1-201ENST00000291527 PIK3CAP42336 1068 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 KIF11P52732 1056 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 INCA1Q0VD86 236 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 DPYDQ12882 1025 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 GEN1Q17RS7 908 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 EOGTQ5NDL2 527 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 TMEM215Q68D42 235 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 LPCAT2Q7L5N7 544 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 PIP4P1Q86T03 277 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 CEP57L1Q8IYX8 460 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 PDZD8Q8NEN9 1154 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 IPO4Q8TEX9 1081 aaKnown RBP9.29□□□□□ -0.92
TFF1-201ENST00000291527 TMEM174Q8WUU8 243 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 ERCC4Q92889 916 aaPredicted RBP9.29□□□□□ -0.92
TFF1-201ENST00000291527 HNRNPABQ99729 332 aaKnown RBP9.29□□□□□ -0.92
TFF1-201ENST00000291527 SCNM1Q9BWG6 230 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 BBS2Q9BXC9 721 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 MAGEF1Q9HAY2 307 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 CYLDQ9NQC7 956 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 TBC1D14Q9P2M4 693 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 CGNQ9P2M7 1197 aaKnown RBP9.29□□□□□ -0.92
TFF1-201ENST00000291527 DEC1Q9P2X7 70 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 BAHCC1Q9P281 2608 aa9.29□□□□□ -0.92
TFF1-201ENST00000291527 MUC22E2RYF6 1773 aaPredicted RBP9.28□□□□□ -0.92
TFF1-201ENST00000291527 CACNG3O60359 315 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 FOXD2O60548 495 aaPredicted RBP9.28□□□□□ -0.92
TFF1-201ENST00000291527 ALDH1A2O94788 518 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 KIF20AO95235 890 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 PROS1P07225 676 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 FAM200BP0CF97 657 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 CD59P13987 128 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 CMA1P23946 247 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 NTSR1P30989 418 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 TUBP50607 506 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 PMS1P54277 932 aaKnown RBP9.28□□□□□ -0.92
TFF1-201ENST00000291527 RAD23BP54727 409 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 BNC1Q01954 994 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 RPL6Q02878 288 aaKnown RBP9.28□□□□□ -0.92
TFF1-201ENST00000291527 ZCWPW2Q504Y3 356 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 C10orf120Q5SQS8 335 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 FYB2Q5VWT5 728 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 PEAR1Q5VY43 1037 aaPredicted RBP9.28□□□□□ -0.92
TFF1-201ENST00000291527 LYSMD4Q5XG99 296 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 GRAMD4Q6IC98 578 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 DDX42Q86XP3 938 aaKnown RBP eCLIP9.28□□□□□ -0.92
TFF1-201ENST00000291527 MARCH9Q86YJ5 346 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 SYT12Q8IV01 421 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 KIAA1958Q8N8K9 716 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 SLC4A11Q8NBS3 891 aa9.28□□□□□ -0.92
TFF1-201ENST00000291527 RBBP8NLQ8NC74 664 aaPredicted RBP9.28□□□□□ -0.92
TFF1-201ENST00000291527 DDX1Q92499 740 aaKnown RBP9.28□□□□□ -0.92
TFF1-201ENST00000291527 GATA6Q92908 595 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms