RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CCDC33Q8N5R6 958 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 TRIML1Q8N9V2 468 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 TFAP2BQ92481 460 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 EZH1Q92800 747 aaPredicted RBP10.28□□□□□ -0.76
CCDC58-201ENST00000291458 ULBP1Q9BZM6 244 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 LRRC4Q9HBW1 653 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 IL37Q9NZH6 218 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 RWDD2AQ9UIY3 292 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 SLC8A2Q9UPR5 921 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 COQ4Q9Y3A0 265 aa10.28□□□□□ -0.76
CCDC58-201ENST00000291458 FAM92AA1XBS5 289 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 NEDD8-MDP1E9PL57 170 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 K7ESF4 209 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 FGFR1OPO95684 399 aaKnown RBP10.27□□□□□ -0.77
CCDC58-201ENST00000291458 RALAP11233 206 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 ATP5C1P36542 298 aaKnown RBP10.27□□□□□ -0.77
CCDC58-201ENST00000291458 USP8P40818 1118 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 TUBP50607 506 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 GOLGA8FQ08AF8 430 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 GOLGA8DPQ0D2H9 430 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 BST2Q10589 180 aaKnown RBP10.27□□□□□ -0.77
CCDC58-201ENST00000291458 GAB4Q2WGN9 574 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 ZNF528Q3MIS6 628 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 CEP68Q76N32 757 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 SCD5Q86SK9 330 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 SIX6OS1Q8N1H7 587 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 UBR7Q8N806 425 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 EDEM1Q92611 657 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 EXOC4Q96A65 974 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 IPO9Q96P70 1041 aaKnown RBP10.27□□□□□ -0.77
CCDC58-201ENST00000291458 IER2Q9BTL4 223 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 FAM117AQ9C073 453 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 ARHGEF4Q9NR80 690 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 COMMD8Q9NX08 183 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 LSM7Q9UK45 103 aaKnown RBP10.27□□□□□ -0.77
CCDC58-201ENST00000291458 RAB23Q9ULC3 237 aa10.27□□□□□ -0.77
CCDC58-201ENST00000291458 RALGAPA1Q6GYQ0 2036 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 SLC12A8A0AV02 714 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 E2F8A0AVK6 867 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 RNF225M0QZC1 329 aaPredicted RBP10.26□□□□□ -0.77
CCDC58-201ENST00000291458 O00370 1275 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 XPO1O14980 1071 aaKnown RBP10.26□□□□□ -0.77
CCDC58-201ENST00000291458 TRIM24O15164 1050 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 MSI1O43347 362 aaKnown RBP10.26□□□□□ -0.77
CCDC58-201ENST00000291458 GNA14O95837 355 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 APODP05090 189 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 VDRP11473 427 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 DRD1P21728 446 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 YWHAGP61981 247 aaKnown RBP eCLIP10.26□□□□□ -0.77
CCDC58-201ENST00000291458 ARHGAP44Q17R89 818 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 SNX30Q5VWJ9 437 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 BTBD8Q5XKL5 378 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 RHBDF2Q6PJF5 856 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 CCDC186Q7Z3E2 898 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.26□□□□□ -0.77
CCDC58-201ENST00000291458 TMEM25Q86YD3 366 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 ANKRD52Q8NB46 1076 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 ZBTB44Q8NCP5 570 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 EHBP1Q8NDI1 1231 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 LMO3Q8TAP4 145 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 SECISBP2LQ93073 1101 aaKnown RBP10.26□□□□□ -0.77
CCDC58-201ENST00000291458 KREMEN1Q96MU8 473 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 MED15Q96RN5 788 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 ZSWIM1Q9BR11 485 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 BBS2Q9BXC9 721 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 KLF16Q9BXK1 252 aaPredicted RBP10.26□□□□□ -0.77
CCDC58-201ENST00000291458 TPSD1Q9BZJ3 242 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 PNPLA8Q9NP80 782 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 UBE2TQ9NPD8 197 aaPredicted RBP10.26□□□□□ -0.77
CCDC58-201ENST00000291458 CYLDQ9NQC7 956 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.26□□□□□ -0.77
CCDC58-201ENST00000291458 PLK2Q9NYY3 685 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 TBC1D14Q9P2M4 693 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 DNMT3LQ9UJW3 386 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 GMEB2Q9UKD1 530 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 INVSQ9Y283 1065 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 PIEZO1Q92508 2521 aa10.26□□□□□ -0.77
CCDC58-201ENST00000291458 KAT7O95251 611 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 KLF8O95600 359 aaPredicted RBP10.25□□□□□ -0.77
CCDC58-201ENST00000291458 ZBED1O96006 694 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 PNMA6AP0CW24 399 aaPredicted RBP10.25□□□□□ -0.77
CCDC58-201ENST00000291458 SETSIPP0DME0 302 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 CORO1AP31146 461 aaKnown RBP10.25□□□□□ -0.77
CCDC58-201ENST00000291458 WASP42768 502 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 NRLP54845 237 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 MCCD1P59942 119 aaPredicted RBP10.25□□□□□ -0.77
CCDC58-201ENST00000291458 GAD2Q05329 585 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 SIM2Q14190 667 aaPredicted RBP10.25□□□□□ -0.77
CCDC58-201ENST00000291458 DMC1Q14565 340 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 C10orf76Q5T2E6 689 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 EMC10Q5UCC4 262 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 LONP2Q86WA8 852 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 SYNPOQ8N3V7 929 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 ALLCQ8N6M5 410 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 SUMF1Q8NBK3 374 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 TSTD1Q8NFU3 115 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 CLEC4CQ8WTT0 213 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 ACDQ96AP0 544 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 GBP4Q96PP9 640 aa10.25□□□□□ -0.77
CCDC58-201ENST00000291458 PNKPQ96T60 521 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms