RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 UXTQ9UBK9 157 aaPredicted RBP19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 HCFC2Q9Y5Z7 792 aa19.73■□□□□ 0.75
PDLIM3-202ENST00000284770 M0QYT0 321 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 PDE2AO00408 941 aaPredicted RBP19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 PSTPIP1O43586 416 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 ZMYND10O75800 440 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 HDAC4P56524 1084 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 PITX1P78337 314 aaPredicted RBP19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 DUSP6Q16828 381 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 HADHQ16836 314 aaKnown RBP19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 RAB6CQ53S08 254 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 OTUD1Q5VV17 481 aaPredicted RBP19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 SNX30Q5VWJ9 437 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 CEP112Q8N8E3 955 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 PGAP3Q96FM1 320 aaPredicted RBP19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 ZNF512Q96ME7 567 aaPredicted RBP19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 RAB6CQ9H0N0 254 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 CALCOCO1Q9P1Z2 691 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 USP18Q9UMW8 372 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 KCNK3O14649 394 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 RALAP11233 206 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 PPP3CCP48454 512 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 MARCKSL1P49006 195 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 SLC25A11Q02978 314 aaKnown RBP19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 POLNQ7Z5Q5 900 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 ELMOD1Q8N336 334 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 MNS1Q8NEH6 495 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 RNF139Q8WU17 664 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 ALG3Q92685 438 aa19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 COLQQ9Y215 455 aaPredicted RBP19.72■□□□□ 0.75
PDLIM3-202ENST00000284770 TADA3O75528 432 aa19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 TRUB2O95900 331 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 RARGP13631 454 aa19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 IL1R2P27930 398 aa19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 HOXA9P31269 272 aa19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 RDXP35241 583 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 NRIP1P48552 1158 aa19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 DCAF12L1Q5VU92 463 aa19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 ZNF276Q8N554 614 aa19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 DQX1Q8TE96 717 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 PBKQ96KB5 322 aa19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 CDCA3Q99618 268 aaPredicted RBP19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 TRPM5Q9NZQ8 1165 aa19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 PCSK1NQ9UHG2 260 aa19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 MYO16Q9Y6X6 1858 aa19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 ZNF638Q14966 1978 aaKnown RBP19.71■□□□□ 0.75
PDLIM3-202ENST00000284770 MYO7AQ13402 2215 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 UQCRHLA0A096LP55 91 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 ZNF840PA6NDX5 716 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 PRPSAP2O60256 369 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 F9P00740 461 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 UQCRHP07919 91 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 KRT7P08729 469 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 ATXN1P54253 815 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 RWDD2BP57060 319 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 DEUP1Q05D60 604 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 ELMSAN1Q6PJG2 1045 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 RSRC2Q7L4I2 434 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 ZNF572Q7Z3I7 529 aaPredicted RBP19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 ADAM32Q8TC27 787 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 PPP2R3CQ969Q6 453 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 SMOC2Q9H3U7 446 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 ZNF334Q9HCZ1 680 aaPredicted RBP19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 OLA1Q9NTK5 396 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 DDIT4Q9NX09 232 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 RNF14Q9UBS8 474 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 RFPL2O75678 378 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 IGLV3-25P01717 112 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 HNRNPA1P09651 372 aaKnown RBP eCLIP19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 GBP1P32455 592 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 CKAP4Q07065 602 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 NME3Q13232 169 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 TXNRD3NBQ6F5E7 133 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 MSANTD2Q6P1R3 559 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 SCYL2Q6P3W7 929 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 TAC4Q86UU9 113 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 MS4A14Q96JA4 679 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 CDK5RAP1Q96SZ6 601 aaKnown RBP19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 LRRC3Q9BY71 257 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 CARD9Q9H257 536 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 FAM204AQ9H8W3 233 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 ZWILCHQ9H900 591 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 PIGVQ9NUD9 493 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 NUDT5Q9UKK9 219 aa19.7■□□□□ 0.74
PDLIM3-202ENST00000284770 CDH23Q9H251 3354 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 MTCL1Q9Y4B5 1905 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 SYNJ2BP-COX16A0A087WUM0 186 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 CCL16O15467 120 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 GJC1P36383 396 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 EIF4EBP2Q13542 120 aaPredicted RBP19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 KCNC3Q14003 757 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 ATP13A4Q4VNC1 1196 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 PABPC1LQ4VXU2 614 aaKnown RBP19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 BOLA3Q53S33 107 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 CYP4V2Q6ZWL3 525 aaPredicted RBP19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 TMEM150AQ86TG1 271 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 KATNAL2Q8IYT4 538 aa19.69■□□□□ 0.74
PDLIM3-202ENST00000284770 CASP10Q92851 521 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms