RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PCDHB8Q9UN66 801 aa21.84■■□□□ 1.09
YBX3-202ENST00000279550 ERICH4A6NGS2 130 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 SGK1O00141 431 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 SHOX2O60902 331 aaPredicted RBP21.83■■□□□ 1.09
YBX3-202ENST00000279550 NPR3P17342 541 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 NR1D1P20393 614 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 IL4RP24394 825 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 GDF10P55107 478 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 ADIGQ0VDE8 80 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 GPS1Q13098 491 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 CLEC20AQ6ZU45 233 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 TRMT10CQ7L0Y3 403 aaKnown RBP21.83■■□□□ 1.09
YBX3-202ENST00000279550 TTC13Q8NBP0 860 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 BBOF1Q8ND07 529 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 CENPIQ92674 756 aaPredicted RBP21.83■■□□□ 1.09
YBX3-202ENST00000279550 ABHD8Q96I13 439 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 COLEC11Q9BWP8 271 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 FRMD8P1Q9BZ68 369 aaPredicted RBP21.83■■□□□ 1.09
YBX3-202ENST00000279550 MARCH5Q9NX47 278 aa21.83■■□□□ 1.09
YBX3-202ENST00000279550 BCCIPQ9P287 314 aaKnown RBP eCLIP21.83■■□□□ 1.09
YBX3-202ENST00000279550 TSC2P49815 1807 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 MYBPHLA2RUH7 354 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 ZBBXA8MT70 800 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 APOC4-APOC2K7ER74 178 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 APOC2P02655 101 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 TYMPP19971 482 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 PCSK1P29120 753 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 PBX3P40426 434 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 BCAR1P56945 870 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 KRT81Q14533 505 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 BOLA3Q53S33 107 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 COL13A1Q5TAT6 717 aaPredicted RBP21.83■■□□□ 1.08
YBX3-202ENST00000279550 TBCBQ99426 244 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 RTP3Q9BQQ7 232 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 MAGEB5Q9BZ81 275 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 CWH43Q9H720 699 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 PCDH9Q9HC56 1237 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 KRT82Q9NSB4 513 aa21.83■■□□□ 1.08
YBX3-202ENST00000279550 NDUFV1P49821 464 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 SKIDA1Q1XH10 827 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 TMEM240Q5SV17 173 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 EMC10Q5UCC4 262 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 TTC19Q6DKK2 380 aaPredicted RBP21.82■■□□□ 1.08
YBX3-202ENST00000279550 OVOS1Q6IE37 1185 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 PSRC1Q6PGN9 363 aaPredicted RBP21.82■■□□□ 1.08
YBX3-202ENST00000279550 B4GALNT4Q76KP1 1039 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 ARCQ7LC44 396 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 UNC45BQ8IWX7 931 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 RNF157Q96PX1 679 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 TMEM30AQ9NV96 361 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 NINJ2Q9NZG7 142 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 CALCOCO1Q9P1Z2 691 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 CDH9Q9ULB4 789 aa21.82■■□□□ 1.08
YBX3-202ENST00000279550 NOVA2Q9UNW9 492 aaKnown RBP21.82■■□□□ 1.08
YBX3-202ENST00000279550 NT5C1B-RDH14C9J2C7 533 aa21.81■■□□□ 1.08
YBX3-202ENST00000279550 IFNB1P01574 187 aa21.81■■□□□ 1.08
YBX3-202ENST00000279550 ALDH7A1P49419 539 aaKnown RBP21.81■■□□□ 1.08
YBX3-202ENST00000279550 CACNA2D1P54289 1103 aa21.81■■□□□ 1.08
YBX3-202ENST00000279550 MAP3K7CLP57077 242 aa21.81■■□□□ 1.08
YBX3-202ENST00000279550 EIF3EP60228 445 aaKnown RBP21.81■■□□□ 1.08
YBX3-202ENST00000279550 YWHAHQ04917 246 aaPredicted RBP21.81■■□□□ 1.08
YBX3-202ENST00000279550 OTUD1Q5VV17 481 aaPredicted RBP21.81■■□□□ 1.08
YBX3-202ENST00000279550 FAM35AQ86V20 835 aa21.81■■□□□ 1.08
YBX3-202ENST00000279550 PQLC3Q8N755 202 aa21.81■■□□□ 1.08
YBX3-202ENST00000279550 CCHCR1Q8TD31 782 aa21.81■■□□□ 1.08
YBX3-202ENST00000279550 TLCD1Q96CP7 247 aa21.81■■□□□ 1.08
YBX3-202ENST00000279550 SMOQ99835 787 aa21.81■■□□□ 1.08
YBX3-202ENST00000279550 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.81■■□□□ 1.08
YBX3-202ENST00000279550 ZMYND8Q9ULU4 1186 aaPredicted RBP21.81■■□□□ 1.08
YBX3-202ENST00000279550 SF3B1O75533 1304 aaKnown RBP eCLIP21.81■■□□□ 1.08
YBX3-202ENST00000279550 ACSL3O95573 720 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 PITX1P78337 314 aaPredicted RBP21.8■■□□□ 1.08
YBX3-202ENST00000279550 PDK2Q15119 407 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 NOMO1Q15155 1222 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 C1orf228Q6PIY5 440 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 TMEM173Q86WV6 379 aaPredicted RBP21.8■■□□□ 1.08
YBX3-202ENST00000279550 DEFB106AQ8N104 65 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 ZCCHC9Q8N567 271 aaKnown RBP21.8■■□□□ 1.08
YBX3-202ENST00000279550 EPS8L3Q8TE67 593 aaKnown RBP21.8■■□□□ 1.08
YBX3-202ENST00000279550 KCTD13Q8WZ19 329 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 ACBD6Q9BR61 282 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 TMEM109Q9BVC6 243 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 CAPS2Q9BXY5 557 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 GPR62Q9BZJ7 368 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 TPX2Q9ULW0 747 aaKnown RBP21.8■■□□□ 1.08
YBX3-202ENST00000279550 SMIM23A6NLE4 172 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 SYN3O14994 580 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 MDM4O15151 490 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 DAB1O75553 588 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 FAM200BP0CF97 657 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 HPDP32754 393 aaPredicted RBP21.8■■□□□ 1.08
YBX3-202ENST00000279550 TFDP2Q14188 446 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 BTG3Q14201 252 aaPredicted RBP21.8■■□□□ 1.08
YBX3-202ENST00000279550 KYNUQ16719 465 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 ANKRD20A8PQ5CZ79 823 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 EFHC1Q5JVL4 640 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 RNASEH2BQ5TBB1 312 aaKnown RBP21.8■■□□□ 1.08
YBX3-202ENST00000279550 GPRIN1Q7Z2K8 1008 aa21.8■■□□□ 1.08
YBX3-202ENST00000279550 CMTR2Q8IYT2 770 aaKnown RBP21.8■■□□□ 1.08
YBX3-202ENST00000279550 CCDC185Q8N715 623 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms