RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 AMPD2Q01433 879 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 CDR2Q01850 454 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 NR1I3Q14994 352 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 PON2Q15165 354 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 PTPN20Q4JDL3 420 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 C2CD6Q53TS8 623 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 DCAF6Q58WW2 860 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 EFHC1Q5JVL4 640 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 CWF19L1Q69YN2 538 aaKnown RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 PM20D1Q6GTS8 502 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 ASTLQ6HA08 431 aaPredicted RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 TRIM72Q6ZMU5 477 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 MMS22LQ6ZRQ5 1243 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 TPGS1Q6ZTW0 290 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 PHLDB2Q86SQ0 1253 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 ZNF677Q86XU0 584 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 DENND1CQ8IV53 801 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 BBS7Q8IWZ6 715 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 PJA1Q8NG27 643 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 ADAM32Q8TC27 787 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 STK32AQ8WU08 396 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 RNF34Q969K3 372 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 EXOC4Q96A65 974 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 ZFRQ96KR1 1074 aaKnown RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 SERPINB11Q96P15 392 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 C11orf70Q9BRQ4 267 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 NUP58Q9BVL2 599 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 KLF16Q9BXK1 252 aaPredicted RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 SLC4A5Q9BY07 1137 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 TRIM5Q9C035 493 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 LINC00597Q9H2U6 94 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 C8orf33Q9H7E9 229 aaPredicted RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 ECT2Q9H8V3 914 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 POPDC2Q9HBU9 364 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 LTB4R2Q9NPC1 389 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 HPS4Q9NQG7 708 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 NOCTQ9UK39 431 aaKnown RBP6.83□□□□□ -1.32
CD44-204ENST00000279452 NAALADL1Q9UQQ1 740 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 SIT1Q9Y3P8 196 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 HCN4Q9Y3Q4 1203 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 PTPRDP23468 1912 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 COL4A3Q01955 1670 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 BRWD1Q9NSI6 2320 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 PATJQ8NI35 1801 aa6.83□□□□□ -1.32
CD44-204ENST00000279452 UNC80Q8N2C7 3258 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 NUP210Q8TEM1 1887 aaPredicted RBP6.82□□□□□ -1.32
CD44-204ENST00000279452 ARNTLO00327 626 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 HSF2BPO75031 334 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 GABBR2O75899 941 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 STC2O76061 302 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 APOEP02649 317 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 CYBBP04839 570 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 CYP17A1P05093 508 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 ADH5P11766 374 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 TCF3P15923 654 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 AOC1P19801 751 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 TNFAIP3P21580 790 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 TARSP26639 723 aaKnown RBP6.82□□□□□ -1.32
CD44-204ENST00000279452 SULT1E1P49888 294 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 TBX4P57082 545 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 STARD6P59095 220 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 YWHAZP63104 245 aaKnown RBP6.82□□□□□ -1.32
CD44-204ENST00000279452 NOMO3P69849 1222 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 CDK17Q00537 523 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 FMO1Q01740 532 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 KDSRQ06136 332 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 KLHL30Q0D2K2 578 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 GRSF1Q12849 480 aaKnown RBP eCLIP6.82□□□□□ -1.32
CD44-204ENST00000279452 NME3Q13232 169 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 LRRC32Q14392 662 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 DHCR24Q15392 516 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 TAF5Q15542 800 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 EML3Q32P44 896 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 LY6G5CQ5SRR4 150 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 SYPL2Q5VXT5 272 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 SMYD5Q6GMV2 418 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 KLHDC10Q6PID8 442 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 C1orf228Q6PIY5 440 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 BHLHA9Q7RTU4 235 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 TMEM110Q86TL2 294 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 TAC4Q86UU9 113 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 RALGPS2Q86X27 583 aaPredicted RBP6.82□□□□□ -1.32
CD44-204ENST00000279452 DEFB106AQ8N104 65 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 SCML4Q8N228 414 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 WDTC1Q8N5D0 677 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 NAT16Q8N8M0 369 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 TMEM105Q8N8V8 129 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 SLC30A5Q8TAD4 765 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 DQX1Q8TE96 717 aaKnown RBP6.82□□□□□ -1.32
CD44-204ENST00000279452 DDX1Q92499 740 aaKnown RBP6.82□□□□□ -1.32
CD44-204ENST00000279452 BAP1Q92560 729 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 WBP2Q969T9 261 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 PLD4Q96BZ4 506 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 OTUB2Q96DC9 234 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 C18orf8Q96DM3 657 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 MSANTD3Q96H12 275 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 PIWIL1Q96J94 861 aaKnown RBP6.82□□□□□ -1.32
CD44-204ENST00000279452 AGPAT1Q99943 283 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 P2RY13Q9BPV8 354 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 FAM83CQ9BQN1 747 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms