RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 BDNFP23560 247 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 L1CAMP32004 1257 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 ACADSBP45954 432 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 MGAT3Q09327 533 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 FBXO36Q8NEA4 188 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 HSFY1Q96LI6 401 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 XPO6Q96QU8 1125 aaKnown RBP18.65■□□□□ 0.58
CAPN1-201ENST00000279247 YJEFN3A6XGL0 299 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 E7ENQ6 273 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 BRAFP15056 766 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 MRPS5P82675 430 aaKnown RBP18.65■□□□□ 0.58
CAPN1-201ENST00000279247 SLC10A2Q12908 348 aaPredicted RBP18.65■□□□□ 0.58
CAPN1-201ENST00000279247 PDK2Q15119 407 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 SMAD1Q15797 465 aaKnown RBP18.65■□□□□ 0.58
CAPN1-201ENST00000279247 TAOK1Q7L7X3 1001 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 FAM35AQ86V20 835 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 ZDHHC17Q8IUH5 632 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 SMOQ99835 787 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 DNAI2Q9GZS0 605 aa18.65■□□□□ 0.58
CAPN1-201ENST00000279247 UPF3AQ9H1J1 476 aaKnown RBP18.65■□□□□ 0.58
CAPN1-201ENST00000279247 PIH1D1Q9NWS0 290 aaKnown RBP18.65■□□□□ 0.58
CAPN1-201ENST00000279247 ENDOD1O94919 500 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 NCAM1P13591 858 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 KRT15P19012 456 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 MATKP42679 507 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 MMP13P45452 471 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 EFHC1Q5JVL4 640 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 ROPN1BQ9BZX4 212 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-201ENST00000279247 STMN4Q9H169 189 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-201ENST00000279247 ROPN1Q9HAT0 212 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-201ENST00000279247 SEPT10Q9P0V9 454 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 SHOC2Q9UQ13 582 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 TRIM17Q9Y577 477 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 RASA4BC9J798 803 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 RASA4O43374 803 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 VIMP08670 466 aaKnown RBP18.64■□□□□ 0.57
CAPN1-201ENST00000279247 ARL4CP56559 192 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 C3orf62Q6ZUJ4 267 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 PALM2Q8IXS6 379 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 SERPINB12Q96P63 405 aa18.64■□□□□ 0.57
CAPN1-201ENST00000279247 RRP15Q9Y3B9 282 aaKnown RBP18.64■□□□□ 0.57
CAPN1-201ENST00000279247 A0A087WUV0 522 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-201ENST00000279247 INHAP05111 366 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 ACLYP53396 1101 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 UPP1Q16831 310 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 C4orf33Q8N1A6 199 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 NAT8LQ8N9F0 302 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 CSPG4P5Q96PW8 444 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 LGMNQ99538 433 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 FARP1Q9Y4F1 1045 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-201ENST00000279247 GABRDO14764 452 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 TRAPPC3O43617 180 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 OR4Q2P0C623 313 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 RDXP35241 583 aaKnown RBP18.63■□□□□ 0.57
CAPN1-201ENST00000279247 PTPN9P43378 593 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 DEUP1Q05D60 604 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 RNF180Q86T96 592 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 TP53INP2Q8IXH6 220 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 PDIK1LQ8N165 341 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.63■□□□□ 0.57
CAPN1-201ENST00000279247 CNOT10Q9H9A5 744 aaKnown RBP18.63■□□□□ 0.57
CAPN1-201ENST00000279247 PIGVQ9NUD9 493 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 MTMR10Q9NXD2 777 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 GIT1Q9Y2X7 761 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 PRG3Q9Y2Y8 225 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-201ENST00000279247 PTCH2Q9Y6C5 1203 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 A6NNZ2 444 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 ARL4AP40617 200 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 TUBB8Q3ZCM7 444 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 EMC10Q5UCC4 262 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 KCNT2Q6UVM3 1135 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 ZMIZ2Q8NF64 920 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 MYLPFQ96A32 169 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 GLT1D1Q96MS3 346 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 TRIM56Q9BRZ2 755 aaKnown RBP18.63■□□□□ 0.57
CAPN1-201ENST00000279247 CHST12Q9NRB3 414 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 SNX10Q9Y5X0 201 aa18.63■□□□□ 0.57
CAPN1-201ENST00000279247 ZNF638Q14966 1978 aaKnown RBP18.62■□□□□ 0.57
CAPN1-201ENST00000279247 TRIM66O15016 1216 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 MDM4O15151 490 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 CDH16O75309 829 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 GPX6P59796 221 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 YWHAGP61981 247 aaKnown RBP eCLIP18.62■□□□□ 0.57
CAPN1-201ENST00000279247 BSPRYQ5W0U4 402 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 IGDCC3Q8IVU1 814 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 PCSK9Q8NBP7 692 aaKnown RBP18.62■□□□□ 0.57
CAPN1-201ENST00000279247 CCNYQ8ND76 341 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 KLHDC9Q8NEP7 349 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 CFAP36Q96G28 342 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 WDR83Q9BRX9 315 aaKnown RBP18.62■□□□□ 0.57
CAPN1-201ENST00000279247 TMEM109Q9BVC6 243 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 USP29Q9HBJ7 922 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 NUP205Q92621 2012 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 FAM107AO95990 144 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 LHX1P48742 406 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 MPP2Q14168 576 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 ZKSCAN8Q15776 578 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-201ENST00000279247 SLC25A52Q3SY17 297 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 LIMS2Q7Z4I7 341 aa18.62■□□□□ 0.57
CAPN1-201ENST00000279247 TEKT4Q8WW24 435 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms