RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 F8VP50 259 aa11.63□□□□□ -0.55
USP6NL-201ENST00000277575 CLASP2O75122 1294 aaKnown RBP11.63□□□□□ -0.55
USP6NL-201ENST00000277575 HDAC4P56524 1084 aa11.63□□□□□ -0.55
USP6NL-201ENST00000277575 OVGP1Q12889 678 aa11.63□□□□□ -0.55
USP6NL-201ENST00000277575 MPP3Q13368 585 aa11.63□□□□□ -0.55
USP6NL-201ENST00000277575 EFL1Q7Z2Z2 1120 aaKnown RBP11.63□□□□□ -0.55
USP6NL-201ENST00000277575 ICA1LQ8NDH6 482 aa11.63□□□□□ -0.55
USP6NL-201ENST00000277575 SERPINB11Q96P15 392 aa11.63□□□□□ -0.55
USP6NL-201ENST00000277575 PDGFDQ9GZP0 370 aaPredicted RBP11.63□□□□□ -0.55
USP6NL-201ENST00000277575 ASTN2O75129 1339 aaPredicted RBP11.62□□□□□ -0.55
USP6NL-201ENST00000277575 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.62□□□□□ -0.55
USP6NL-201ENST00000277575 LZTS3O60299 673 aaPredicted RBP11.62□□□□□ -0.55
USP6NL-201ENST00000277575 MSCO60682 206 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 LTFP02788 710 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 PDHA1P08559 390 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 NFICP08651 508 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 SERPINF2P08697 491 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 WEE1P30291 646 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 TUBP50607 506 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 FKBP1BP68106 108 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 SP3Q02447 781 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 CNGA2Q16280 664 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 STRA8Q7Z7C7 330 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 UNC93AQ86WB7 457 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 LRRC34Q8IZ02 419 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 TMEM86AQ8N2M4 240 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 FAM136AQ96C01 138 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 ULBP1Q9BZM6 244 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 SLC7A5P2Q9GIP4 190 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 CCDC90BQ9GZT6 254 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 PDGFCQ9NRA1 345 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 KIF17Q9P2E2 1029 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 SNX5Q9Y5X3 404 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 BCL9LQ86UU0 1499 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 CCT8L1PA6NM43 557 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 SMIM10L2AP0DMW4 78 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 SMIM10L2BP0DMW5 78 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 CCDC130P13994 396 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 MLH1P40692 756 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 PPP3CCP48454 512 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 RENBPP51606 427 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 INPP5AQ14642 412 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 ACAP1Q15027 740 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 TREML2Q5T2D2 321 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 ANKS3Q6ZW76 656 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 DPF3Q92784 378 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 TEX12Q9BXU0 123 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 YY1AP1Q9H869 796 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 SCUBE2Q9NQ36 999 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 WWOXQ9NZC7 414 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 DCDC2Q9UHG0 476 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 DPP7Q9UHL4 492 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 EPHB6O15197 1021 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 CRTAMO95727 393 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 ITGALP20701 1170 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 GLRBP48167 497 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 ZACNQ401N2 412 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 MIIPQ5JXC2 388 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 WSCD1Q658N2 575 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 KDM7AQ6ZMT4 941 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.62□□□□□ -0.55
USP6NL-201ENST00000277575 TNFRSF25Q93038 417 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 BRD8Q9H0E9 1235 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 NMRK2Q9NPI5 230 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 PSD3Q9NYI0 1048 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 SLC24A2Q9UI40 661 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 ACOT9Q9Y305 439 aa11.62□□□□□ -0.55
USP6NL-201ENST00000277575 SPDYE5A6NIY4 337 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 PPP1R11O60927 126 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 TUFMP49411 452 aaKnown RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 SERPINB8P50452 374 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 MGAT5Q09328 741 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 UGCGQ16739 394 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 SPDYE7PQ495Y7 208 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 SLC39A12Q504Y0 691 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 SETD3Q86TU7 594 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 LONP2Q86WA8 852 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 HTR3CQ8WXA8 447 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 SHC3Q92529 594 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 CDK5RAP1Q96SZ6 601 aaKnown RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 MYCBPQ99417 103 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 ACO2Q99798 780 aaKnown RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 SHCBP1LQ9BZQ2 653 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 CLPBQ9H078 707 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 VANGL2Q9ULK5 521 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 YBX3P16989 372 aaKnown RBP eCLIP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 PTPN1P18031 435 aaKnown RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 EEF1DP29692 281 aaKnown RBP11.61□□□□□ -0.55
USP6NL-201ENST00000277575 OR1E1P30953 314 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 RTP1P59025 263 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 KCNMA1Q12791 1236 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 NOGQ13253 232 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 EEF1DP3Q658K8 133 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 HERC6Q8IVU3 1022 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 OR5B17Q8NGF7 314 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 TEKT4Q8WW24 435 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 FAM167BQ9BTA0 163 aa11.61□□□□□ -0.55
USP6NL-201ENST00000277575 ADGRE3Q9BY15 652 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms