RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CSNK1G1Q9HCP0 422 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 CNGB3Q9NQW8 809 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 TMEM30AQ9NV96 361 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 DSEQ9UL01 958 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 FZD10Q9ULW2 581 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 HEY1Q9Y5J3 304 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.97□□□□□ -0.81
TRIM55-201ENST00000276573 BCLAF3A2AJT9 711 aaKnown RBP9.97□□□□□ -0.81
TRIM55-201ENST00000276573 M0QYT0 321 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 FYNP06241 537 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 ABHD2P08910 425 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 LSP1P33241 339 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 APLP1P51693 650 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 CACNA2D1P54289 1103 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 HNRNPH2P55795 449 aaKnown RBP9.97□□□□□ -0.81
TRIM55-201ENST00000276573 OTUD1Q5VV17 481 aaPredicted RBP9.97□□□□□ -0.81
TRIM55-201ENST00000276573 ANKRD22Q5VYY1 191 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 HFE2Q6ZVN8 426 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 CENPUQ71F23 418 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 SLC24A5Q71RS6 500 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 FAM131BQ86XD5 332 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 SLAIN1Q8ND83 568 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 SMARCD1Q96GM5 515 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 SUSD3Q96L08 255 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 TTC25Q96NG3 672 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 CSPG4P5Q96PW8 444 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 PKMYT1Q99640 499 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 CNOT10Q9H9A5 744 aaKnown RBP9.97□□□□□ -0.81
TRIM55-201ENST00000276573 STARD7Q9NQZ5 370 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 CWC15Q9P013 229 aaKnown RBP9.97□□□□□ -0.81
TRIM55-201ENST00000276573 STAP1Q9ULZ2 295 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 NAALADL1Q9UQQ1 740 aa9.97□□□□□ -0.81
TRIM55-201ENST00000276573 CFAP69A5D8W1 941 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 SRRM3A6NNA2 597 aaPredicted RBP9.96□□□□□ -0.81
TRIM55-201ENST00000276573 YJEFN3A6XGL0 299 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 E7ENQ6 273 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 ARVCFO00192 962 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 FKTNO75072 461 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 IVLP07476 585 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 AMPD1P23109 780 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 RBL1P28749 1068 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 NR2C2P49116 596 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 NRLP54845 237 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 SLC10A2Q12908 348 aaPredicted RBP9.96□□□□□ -0.81
TRIM55-201ENST00000276573 XRCC4Q13426 336 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 ARHGEF6Q15052 776 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 INTS6LQ5JSJ4 861 aaKnown RBP9.96□□□□□ -0.81
TRIM55-201ENST00000276573 OVOS1Q6IE37 1185 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 GPRIN1Q7Z2K8 1008 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 LRRTM3Q86VH5 581 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 THEM5Q8N1Q8 247 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 PYROXD2Q8N2H3 581 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 LINC01599Q8WXQ3 324 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 MYLPFQ96A32 169 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 RTP4Q96DX8 246 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 PHACTR1Q9C0D0 580 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 EPN3Q9H201 632 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 PRDM16Q9HAZ2 1276 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 TMLHEQ9NVH6 421 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 PHF24Q9UPV7 400 aa9.96□□□□□ -0.81
TRIM55-201ENST00000276573 A0A087WUV0 522 aaPredicted RBP9.95□□□□□ -0.82
TRIM55-201ENST00000276573 TCRBV7S3A2A0A539 114 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 ARHGEF37A1IGU5 675 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 E7EVH7 732 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 GOLGA8MH3BSY2 632 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 CAPN9O14815 690 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 KCNN4O15554 427 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 DDHD2O94830 711 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 ZBED1O96006 694 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 ITGB1P05556 798 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 USP17L7P0C7H9 530 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 TYMPP19971 482 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 YY1P25490 414 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 GRK4P32298 578 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 MMP13P45452 471 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 VEGFBP49765 207 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 ARL4CP56559 192 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 GAD2Q05329 585 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 DEUP1Q05D60 604 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 PDIA2Q13087 525 aaKnown RBP9.95□□□□□ -0.82
TRIM55-201ENST00000276573 FASTKD3Q14CZ7 662 aaKnown RBP9.95□□□□□ -0.82
TRIM55-201ENST00000276573 HIF1AQ16665 826 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 HP1BP3Q5SSJ5 553 aaPredicted RBP9.95□□□□□ -0.82
TRIM55-201ENST00000276573 FNBP1LQ5T0N5 605 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 GLB1LQ6UWU2 654 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 EXOC3L1Q86VI1 746 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 ZNF280BQ86YH2 543 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 TAB3Q8N5C8 712 aaPredicted RBP9.95□□□□□ -0.82
TRIM55-201ENST00000276573 BCAS4Q8TDM0 211 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 HASPINQ8TF76 798 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 CENPTQ96BT3 561 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 TMEM209Q96SK2 561 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 SLC9A7Q96T83 725 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 RHOBTB2Q9BYZ6 727 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 PAK5Q9P286 719 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 RCOR3Q9P2K3 495 aaPredicted RBP9.95□□□□□ -0.82
TRIM55-201ENST00000276573 ZMYND8Q9ULU4 1186 aaPredicted RBP9.95□□□□□ -0.82
TRIM55-201ENST00000276573 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.95□□□□□ -0.82
TRIM55-201ENST00000276573 USP3Q9Y6I4 520 aa9.95□□□□□ -0.82
TRIM55-201ENST00000276573 SYNJ2BP-COX16A0A087WUM0 186 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms