RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 MTDHQ86UE4 582 aaKnown RBP8.21□□□□□ -1.1
LIMD1-201ENST00000273317 TBCBQ99426 244 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 SLC25A13Q9UJS0 675 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 MYRFQ9Y2G1 1151 aa8.21□□□□□ -1.1
LIMD1-201ENST00000273317 ANKRD26Q9UPS8 1709 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 CYP27B1O15528 508 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 KRT34O76011 436 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 SPP2Q13103 211 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF177Q13360 481 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 FAM84BQ96KN1 310 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 ASB2Q96Q27 587 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 CYP3A43Q9HB55 503 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 BTBD7Q9P203 1132 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 PRR36Q9H6K5 1346 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 MGAT4DA6NG13 374 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 CYP19A1P11511 503 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 PIK3CGP48736 1102 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 PMF1Q6P1K2 205 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 MDM1Q8TC05 714 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 RIN2Q8WYP3 895 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 FUT8Q9BYC5 575 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 HMG20AQ9NP66 347 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 AVENQ9NQS1 362 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 SAR1AQ9NR31 198 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 CPA2P48052 419 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 CACNA2D1P54289 1103 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 PTENP60484 403 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 KCNT1Q5JUK3 1230 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 SAMD4BQ5PRF9 694 aaKnown RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 C16orf62Q7Z3J2 963 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 HAO1Q9UJM8 370 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 DOLKQ9UPQ8 538 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 MAPRE3Q9UPY8 281 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 A0A087WXM4 84 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 HMGCS2P54868 508 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 R3HDM1Q15032 1099 aaKnown RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 PDZK1Q5T2W1 519 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 STRA8Q7Z7C7 330 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 HERC6Q8IVU3 1022 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 OXNAD1Q96HP4 312 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 CD248Q9HCU0 757 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 TCF7L2Q9NQB0 619 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 RRN3Q9NYV6 651 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 UBQLN1Q9UMX0 589 aaKnown RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 POLRMTO00411 1230 aaKnown RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 ATP6V1G2O95670 118 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 NDUFB10O96000 172 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 FASP25445 335 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 GRK4P32298 578 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 IL12RB1P42701 662 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 MMP14P50281 582 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF135P52742 658 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 KLHL12Q53G59 568 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 TMC5Q6UXY8 1006 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF438Q7Z4V0 828 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 MOSPD2Q8NHP6 518 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 DAGLAQ9Y4D2 1042 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 SPATA31A3Q5VYP0 1347 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 PEX1O43933 1283 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 PDHBP11177 359 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 TTKP33981 857 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 NFYCQ13952 458 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 MYBPC2Q14324 1141 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 GRTP1Q5TC63 336 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 HDHD2Q9H0R4 259 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 VANGL2Q9ULK5 521 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 ATXN2Q99700 1313 aaKnown RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 GNG14A0A1W2PPG7 69 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 CLTBP09497 229 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 DARSP14868 501 aaKnown RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 TFE3P19532 575 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 TGFBR2P37173 567 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 CDK7P50613 346 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 SEC24CP53992 1094 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 UGT2B28Q9BY64 529 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 UBDO15205 165 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 PHGDHO43175 533 aaKnown RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 RPS6KA5O75582 802 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 KRT6AP02538 564 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 KLK7P49862 253 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 PGS1Q32NB8 556 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF484Q5JVG2 852 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 SCARA3Q6AZY7 606 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 ERAP2Q6P179 960 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 CASP12Q6UXS9 341 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 TMPRSS6Q8IU80 811 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 UCMAQ8WVF2 138 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 ZNF184Q99676 751 aaPredicted RBP8.2□□□□□ -1.1
LIMD1-201ENST00000273317 YIPF2Q9BWQ6 316 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 ZFYVE1Q9HBF4 777 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 CYP39A1Q9NYL5 469 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 STON1Q9Y6Q2 735 aa8.2□□□□□ -1.1
LIMD1-201ENST00000273317 VDRP11473 427 aa8.19□□□□□ -1.1
LIMD1-201ENST00000273317 CCNG2Q16589 344 aa8.19□□□□□ -1.1
LIMD1-201ENST00000273317 PDPK2PQ6A1A2 396 aa8.19□□□□□ -1.1
LIMD1-201ENST00000273317 SLFN11Q7Z7L1 901 aa8.19□□□□□ -1.1
LIMD1-201ENST00000273317 BTBD10Q9BSF8 475 aa8.19□□□□□ -1.1
LIMD1-201ENST00000273317 PHACTR1Q9C0D0 580 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms