RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 KIAA1671Q9BY89 1806 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 GAS8O95995 478 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 GALTP07902 379 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 GJA8P48165 433 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 GPR15P49685 360 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 ITGA8P53708 1063 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 KRT81Q14533 505 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 ALS2CLQ60I27 953 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 FBXO46Q6PJ61 603 aaPredicted RBP12.62□□□□□ -0.39
SDE2-201ENST00000272091 VSIG1Q86XK7 387 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 ADAM32Q8TC27 787 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 PWWP2AQ96N64 755 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 PNPLA8Q9NP80 782 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 SYN3O14994 580 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 LTFP02788 710 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 NRLP54845 237 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 NOMO1Q15155 1222 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 TTC9BQ8N6N2 239 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 ZNF670Q9BS34 389 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 ZNF148Q9UQR1 794 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 ARHGEF37A1IGU5 675 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 ZNF487B1APH4 448 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 M0QYT0 321 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 TBC1D4O60343 1298 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 FAM171A1Q5VUB5 890 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 UNC45BQ8IWX7 931 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 OR2W6PQ8NHA6 318 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 VN1R3Q9BXE9 311 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 DHX35Q9H5Z1 703 aaKnown RBP12.62□□□□□ -0.39
SDE2-201ENST00000272091 CWH43Q9H720 699 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 PLAAQ9Y263 795 aa12.62□□□□□ -0.39
SDE2-201ENST00000272091 ITIH2P19823 946 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 RDXP35241 583 aaKnown RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 MAPRE1Q15691 268 aaKnown RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 RTP2Q5QGT7 225 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 FAM43BQ6ZT52 329 aaPredicted RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 SPATA2LQ8IUW3 424 aaPredicted RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 EDEM1Q92611 657 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 NCAPGQ9BPX3 1015 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 CWC15Q9P013 229 aaKnown RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 FEZ2Q9UHY8 353 aaPredicted RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 SYNJ2BP-COX16A0A087WUM0 186 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 ATF2P15336 505 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 GBP1P32455 592 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 SLC5A3P53794 718 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 GYS2P54840 703 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 SLC10A2Q12908 348 aaPredicted RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 TTMPQ5BVD1 217 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 PPP6R3Q5H9R7 873 aaPredicted RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 HIBCHQ6NVY1 386 aaPredicted RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 FUT10Q6P4F1 479 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 TMCO2Q7Z6W1 182 aaPredicted RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 IRGQQ8WZA9 623 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 FRMD8P1Q9BZ68 369 aaPredicted RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 ETNK2Q9NVF9 386 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 COX16Q9P0S2 106 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 FAN1Q9Y2M0 1017 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 ATP8A1Q9Y2Q0 1164 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 PARNO95453 639 aaKnown RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 ADCY8P40145 1251 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 EIF4EBP2Q13542 120 aaPredicted RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 C1orf228Q6PIY5 440 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 TTC13Q8NBP0 860 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 SLC7A14Q8TBB6 771 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 ARL8AQ96BM9 186 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 LRRC45Q96CN5 670 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 PGAP3Q96FM1 320 aaPredicted RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 PAWRQ96IZ0 340 aaKnown RBP12.61□□□□□ -0.39
SDE2-201ENST00000272091 CSPG4P5Q96PW8 444 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 TMEM175Q9BSA9 504 aa12.61□□□□□ -0.39
SDE2-201ENST00000272091 TRIM43BA6NCK2 446 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 ALDH2P05091 517 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 GOT1P17174 413 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 EIF3EP60228 445 aaKnown RBP12.6□□□□□ -0.39
SDE2-201ENST00000272091 NME3Q13232 169 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 P3H1Q32P28 736 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 CFAP58Q5T655 872 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 SDHAF4Q5VUM1 108 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 IZUMO3Q5VZ72 239 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 CNKSR3Q6P9H4 555 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 GSTA5Q7RTV2 222 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 CEP57Q86XR8 500 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 LRRN4Q8WUT4 740 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 TRIM43Q96BQ3 446 aaPredicted RBP12.6□□□□□ -0.39
SDE2-201ENST00000272091 CRISPLD1Q9H336 500 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 ABI2Q9NYB9 513 aaPredicted RBP12.6□□□□□ -0.39
SDE2-201ENST00000272091 POLR3GO15318 223 aaPredicted RBP12.6□□□□□ -0.39
SDE2-201ENST00000272091 TRAPPC3O43617 180 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 DGKIO75912 1065 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 CLTBP09497 229 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 NCAM1P13591 858 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 LMNB2Q03252 620 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 C4orf50Q6ZRC1 276 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 ZNF365Q70YC5 407 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 SCD5Q86SK9 330 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 FAM129AQ9BZQ8 928 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 ACBD3Q9H3P7 528 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 TMEM39AQ9NV64 488 aa12.6□□□□□ -0.39
SDE2-201ENST00000272091 ALPK3Q96L96 1907 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms