RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 PEX5P50542 639 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 C2orf54Q08AI8 447 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 INTS6LQ5JSJ4 861 aaKnown RBP25.77■■□□□ 1.72
SSBP4-201ENST00000270061 DNAJB7Q7Z6W7 309 aaPredicted RBP25.77■■□□□ 1.72
SSBP4-201ENST00000270061 PARD6BQ9BYG5 372 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 MFSD1Q9H3U5 465 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 TMLHEQ9NVH6 421 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 SMARCAL1Q9NZC9 954 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 CYTH4Q9UIA0 394 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 NME7Q9Y5B8 376 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 PCDHA3Q9Y5H8 950 aa25.77■■□□□ 1.72
SSBP4-201ENST00000270061 GABRB2P47870 512 aa25.76■■□□□ 1.71
SSBP4-201ENST00000270061 VEPH1Q14D04 833 aa25.76■■□□□ 1.71
SSBP4-201ENST00000270061 PTPN20Q4JDL3 420 aa25.76■■□□□ 1.71
SSBP4-201ENST00000270061 PPP1R15BQ5SWA1 713 aa25.76■■□□□ 1.71
SSBP4-201ENST00000270061 C3orf20Q8ND61 904 aa25.76■■□□□ 1.71
SSBP4-201ENST00000270061 OR6B3Q8NGW1 331 aa25.76■■□□□ 1.71
SSBP4-201ENST00000270061 LRRC3Q9BY71 257 aa25.76■■□□□ 1.71
SSBP4-201ENST00000270061 EPC1Q9H2F5 836 aa25.76■■□□□ 1.71
SSBP4-201ENST00000270061 WDR35Q9P2L0 1181 aa25.76■■□□□ 1.71
SSBP4-201ENST00000270061 ARIH1Q9Y4X5 557 aaPredicted RBP25.76■■□□□ 1.71
SSBP4-201ENST00000270061 DENND4CQ5VZ89 1909 aa25.76■■□□□ 1.71
SSBP4-201ENST00000270061 PGRMC1O00264 195 aaKnown RBP25.75■■□□□ 1.71
SSBP4-201ENST00000270061 SPOPO43791 374 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 PROSCO94903 275 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 HAPLN1P10915 354 aaPredicted RBP25.75■■□□□ 1.71
SSBP4-201ENST00000270061 ATF6P18850 670 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 WARSP23381 471 aaKnown RBP25.75■■□□□ 1.71
SSBP4-201ENST00000270061 GNL1P36915 607 aaPredicted RBP25.75■■□□□ 1.71
SSBP4-201ENST00000270061 DCAF12L1Q5VU92 463 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 ARHGAP17Q68EM7 881 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 POTEHQ6S545 545 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 PHLDB2Q86SQ0 1253 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 TMC8Q8IU68 726 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 KXD1Q9BQD3 176 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 LPIN3Q9BQK8 851 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 WNT16Q9UBV4 365 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 RAB21Q9UL25 225 aa25.75■■□□□ 1.71
SSBP4-201ENST00000270061 TARSL2A2RTX5 802 aaKnown RBP25.74■■□□□ 1.71
SSBP4-201ENST00000270061 TMEM191CA6NGB0 347 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 M0QYV0 167 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 NRG2O14511 850 aaPredicted RBP25.74■■□□□ 1.71
SSBP4-201ENST00000270061 MOSPD3O75425 235 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 GJA1P17302 382 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 MAN1A1P33908 653 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 ACOT1Q86TX2 421 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 ALG3Q92685 438 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 C18orf8Q96DM3 657 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 TRIM7Q9C029 511 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 TSPAN16Q9UKR8 245 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 PTPRDP23468 1912 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 A8MXQ7 604 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 HCRTO43612 131 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 ZNF268Q14587 947 aaPredicted RBP25.74■■□□□ 1.71
SSBP4-201ENST00000270061 PKDCCQ504Y2 493 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 DNAJC24Q6P3W2 148 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 FBXO38Q6PIJ6 1188 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 SIX5Q8N196 739 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 SHKBP1Q8TBC3 707 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 KRT35Q92764 455 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 PKMYT1Q99640 499 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 SNX25Q9H3E2 840 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 SLC2A4RGQ9NR83 387 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 ARGLU1Q9NWB6 273 aaPredicted RBP25.74■■□□□ 1.71
SSBP4-201ENST00000270061 IP6K2Q9UHH9 426 aa25.74■■□□□ 1.71
SSBP4-201ENST00000270061 ZNF638Q14966 1978 aaKnown RBP25.73■■□□□ 1.71
SSBP4-201ENST00000270061 A0A1W2PRU2 124 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 RHOXF2BP0C7M4 288 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 SETSIPP0DME0 302 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 TEAD2Q15562 447 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 TAF12Q16514 161 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 CCDC70Q6NSX1 233 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 C12orf29Q8N999 325 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 GPR152Q8TDT2 470 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 CPXM1Q96SM3 734 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 RHOXF2Q9BQY4 288 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 MIS12Q9H081 205 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 SLITRK6Q9H5Y7 841 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 RBM12Q9NTZ6 932 aaKnown RBP25.73■■□□□ 1.71
SSBP4-201ENST00000270061 CDH9Q9ULB4 789 aa25.73■■□□□ 1.71
SSBP4-201ENST00000270061 ECI2O75521 394 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 FGF19O95750 216 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 LMO2P25791 158 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 VCPP55072 806 aaKnown RBP25.72■■□□□ 1.71
SSBP4-201ENST00000270061 PDCLQ13371 301 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 GLE1Q53GS7 698 aaKnown RBP25.72■■□□□ 1.71
SSBP4-201ENST00000270061 FAM78AQ5JUQ0 283 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 PPP1R26Q5T8A7 1209 aaPredicted RBP25.72■■□□□ 1.71
SSBP4-201ENST00000270061 GIPC2Q8TF65 315 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 ASB16Q96NS5 453 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 NAP1L3Q99457 506 aaPredicted RBP25.72■■□□□ 1.71
SSBP4-201ENST00000270061 SYT15Q9BQS2 421 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 ZNF334Q9HCZ1 680 aaPredicted RBP25.72■■□□□ 1.71
SSBP4-201ENST00000270061 SIGLEC16A6NMB1 481 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 AVPR2P30518 371 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 WDR93Q6P2C0 686 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 SPATA2LQ8IUW3 424 aaPredicted RBP25.72■■□□□ 1.71
SSBP4-201ENST00000270061 ELSPBP1Q96BH3 223 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 ZSWIM3Q96MP5 696 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 KCNH6Q9H252 994 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms