RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 MTF1Q14872 753 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 EFHC1Q5JVL4 640 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 TADA2BQ86TJ2 420 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 PHF13Q86YI8 300 aaPredicted RBP13.34□□□□□ -0.27
SS18-202ENST00000269138 YAF2Q8IY57 180 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 DEFB106AQ8N104 65 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 DEPDC1BQ8WUY9 529 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 GOLGA1Q92805 767 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 LINC00597Q9H2U6 94 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 ABHD10Q9NUJ1 306 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 ADAM22Q9P0K1 906 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 DUSP12Q9UNI6 340 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 BZW2Q9Y6E2 419 aaKnown RBP13.34□□□□□ -0.27
SS18-202ENST00000269138 WNT6Q9Y6F9 365 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 NCOR1O75376 2440 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 SLC12A8A0AV02 714 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 TNFRSF10AO00220 468 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 ZNF263O14978 683 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 MSI1O43347 362 aaKnown RBP13.34□□□□□ -0.27
SS18-202ENST00000269138 DCXO43602 365 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 GREM1O60565 184 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 GJB6O95452 261 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 SRFP11831 508 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 TCF3P15923 654 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 EIF4A3P38919 411 aaKnown RBP13.34□□□□□ -0.27
SS18-202ENST00000269138 TNK2Q07912 1038 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 FAM102AQ5T9C2 384 aaPredicted RBP13.34□□□□□ -0.27
SS18-202ENST00000269138 TRIM68Q6AZZ1 485 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 MSANTD2Q6P1R3 559 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 TOGARAM2Q6ZUX3 1019 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 MON1BQ7L1V2 547 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 SLC26A9Q7LBE3 791 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 TC2NQ8N9U0 490 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 MSANTD4Q8NCY6 345 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 ADAM32Q8TC27 787 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 DQX1Q8TE96 717 aaKnown RBP13.34□□□□□ -0.27
SS18-202ENST00000269138 SLC2A13Q96QE2 648 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 CDK5RAP1Q96SZ6 601 aaKnown RBP13.34□□□□□ -0.27
SS18-202ENST00000269138 CHP1Q99653 195 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.34□□□□□ -0.27
SS18-202ENST00000269138 BRD9Q9H8M2 597 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 POPDC2Q9HBU9 364 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 OLA1Q9NTK5 396 aaKnown RBP13.34□□□□□ -0.27
SS18-202ENST00000269138 ASNSD1Q9NWL6 643 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 ADAMTS1Q9UHI8 967 aa13.34□□□□□ -0.27
SS18-202ENST00000269138 BDP1A6H8Y1 2624 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 NUP210Q8TEM1 1887 aaPredicted RBP13.33□□□□□ -0.28
SS18-202ENST00000269138 A0A087X0T9 212 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 ARNTLO00327 626 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 CAPN9O14815 690 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 CHADO15335 359 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 HSF2BPO75031 334 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 STC2O76061 302 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 FTLP02792 175 aaPredicted RBP13.33□□□□□ -0.28
SS18-202ENST00000269138 GLI1P08151 1106 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 FAM228BP0C875 321 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 ARSAP15289 507 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 DCAF6Q58WW2 860 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 TRNP1Q6NT89 227 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 BEND5Q7L4P6 421 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 ZDHHC17Q8IUH5 632 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 CNGA4Q8IV77 575 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 DRC7Q8IY82 874 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 MCOLN2Q8IZK6 566 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 TTC8Q8TAM2 541 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 FAM83CQ9BQN1 747 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 SLC2A4RGQ9NR83 387 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 THG1LQ9NWX6 298 aaKnown RBP13.33□□□□□ -0.28
SS18-202ENST00000269138 DUS2Q9NX74 493 aaKnown RBP13.33□□□□□ -0.28
SS18-202ENST00000269138 STRIP2Q9ULQ0 834 aa13.33□□□□□ -0.28
SS18-202ENST00000269138 KLKB1P03952 638 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 GZMAP12544 262 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 SCNN1AP37088 669 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 C1QBPQ07021 282 aaKnown RBP13.32□□□□□ -0.28
SS18-202ENST00000269138 TSR1Q2NL82 804 aaKnown RBP13.32□□□□□ -0.28
SS18-202ENST00000269138 ARHGAP29Q52LW3 1261 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 CC2D1AQ6P1N0 951 aaPredicted RBP13.32□□□□□ -0.28
SS18-202ENST00000269138 TAC4Q86UU9 113 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 DDX42Q86XP3 938 aaKnown RBP eCLIP13.32□□□□□ -0.28
SS18-202ENST00000269138 UBALD2Q8IYN6 164 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 SPC24Q8NBT2 197 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 EDAQ92838 391 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 ADAM33Q9BZ11 813 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 EBF3Q9H4W6 596 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 EPHX3Q9H6B9 360 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 HPS4Q9NQG7 708 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 METTL5Q9NRN9 209 aaKnown RBP13.32□□□□□ -0.28
SS18-202ENST00000269138 ZNHIT6Q9NWK9 470 aaKnown RBP13.32□□□□□ -0.28
SS18-202ENST00000269138 TMEM59LQ9UK28 342 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 SH3BP1Q9Y3L3 701 aa13.32□□□□□ -0.28
SS18-202ENST00000269138 TCRBV5S1A1TA0A578 114 aa13.31□□□□□ -0.28
SS18-202ENST00000269138 E2F8A0AVK6 867 aa13.31□□□□□ -0.28
SS18-202ENST00000269138 OTOL1A6NHN0 477 aaPredicted RBP13.31□□□□□ -0.28
SS18-202ENST00000269138 PI4K2BG5E9Z4 385 aa13.31□□□□□ -0.28
SS18-202ENST00000269138 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
SS18-202ENST00000269138 RTN2O75298 545 aa13.31□□□□□ -0.28
SS18-202ENST00000269138 DAB1O75553 588 aa13.31□□□□□ -0.28
SS18-202ENST00000269138 CALB1P05937 261 aa13.31□□□□□ -0.28
SS18-202ENST00000269138 TFE3P19532 575 aaPredicted RBP13.31□□□□□ -0.28
SS18-202ENST00000269138 RRM1P23921 792 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms