RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 BAIAP3O94812 1187 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 GAS8O95995 478 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 APOC2P02655 101 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 HLTFQ14527 1009 aaKnown RBP eCLIP17.04■□□□□ 0.32
TPM1-201ENST00000267996 BSPRYQ5W0U4 402 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 ZDHHC24Q6UX98 284 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 RFX6Q8HWS3 928 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 MREGQ8N565 214 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 CCDC185Q8N715 623 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 SCAMP5Q8TAC9 235 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 ACTL9Q8TC94 416 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 VN1R3Q9BXE9 311 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 FAM129AQ9BZQ8 928 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 TRIM31Q9BZY9 425 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 IL37Q9NZH6 218 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 AP4E1Q9UPM8 1137 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 SNX24Q9Y343 169 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 CAPN9O14815 690 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 VNN2O95498 520 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 ITGAVP06756 1048 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 IVDP26440 423 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 TNNT3P45378 269 aaPredicted RBP17.04■□□□□ 0.32
TPM1-201ENST00000267996 DEUP1Q05D60 604 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 PPP1R7Q15435 360 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 SLC9A4Q6AI14 798 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 KCNT2Q6UVM3 1135 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 FAM131BQ86XD5 332 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 CMTR2Q8IYT2 770 aaKnown RBP17.04■□□□□ 0.32
TPM1-201ENST00000267996 PQLC3Q8N755 202 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 C2orf15Q8WU43 125 aaKnown RBP17.04■□□□□ 0.32
TPM1-201ENST00000267996 NTAN1Q96AB6 310 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 GDAP1L1Q96MZ0 367 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 WDR6Q9NNW5 1121 aaKnown RBP17.04■□□□□ 0.32
TPM1-201ENST00000267996 IL23AQ9NPF7 189 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 PIGVQ9NUD9 493 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 BACE2Q9Y5Z0 518 aa17.04■□□□□ 0.32
TPM1-201ENST00000267996 MTMR11A4FU01 709 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 NCAM1P13591 858 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 KLRC2P26717 231 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 AIF1P55008 147 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 DYNLT1P63172 113 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 OTUD4Q01804 1114 aaKnown RBP17.03■□□□□ 0.32
TPM1-201ENST00000267996 USP41Q3LFD5 358 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 ANKRD20A8PQ5CZ79 823 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 SCN4BQ8IWT1 228 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 NUP93Q8N1F7 819 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 ALLCQ8N6M5 410 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 ATAD1Q8NBU5 361 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 PCDH19Q8TAB3 1148 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 SLC7A14Q8TBB6 771 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 SPPL2BQ8TCT7 592 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 PIK3R5Q8WYR1 880 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 CCDC114Q96M63 670 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 KCTD15Q96SI1 283 aaPredicted RBP17.03■□□□□ 0.32
TPM1-201ENST00000267996 MAK16Q9BXY0 300 aaKnown RBP17.03■□□□□ 0.32
TPM1-201ENST00000267996 DHX35Q9H5Z1 703 aaKnown RBP17.03■□□□□ 0.32
TPM1-201ENST00000267996 WHRNQ9P202 907 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 RCOR3Q9P2K3 495 aaPredicted RBP17.03■□□□□ 0.32
TPM1-201ENST00000267996 MTRRQ9UBK8 725 aa17.03■□□□□ 0.32
TPM1-201ENST00000267996 F9P00740 461 aa17.02■□□□□ 0.32
TPM1-201ENST00000267996 IGLV3-25P01717 112 aa17.02■□□□□ 0.32
TPM1-201ENST00000267996 ACRP10323 421 aa17.02■□□□□ 0.32
TPM1-201ENST00000267996 SCAPQ12770 1279 aa17.02■□□□□ 0.32
TPM1-201ENST00000267996 EIF4EBP2Q13542 120 aaPredicted RBP17.02■□□□□ 0.32
TPM1-201ENST00000267996 SLC8B1Q6J4K2 584 aa17.02■□□□□ 0.32
TPM1-201ENST00000267996 SCD5Q86SK9 330 aa17.02■□□□□ 0.32
TPM1-201ENST00000267996 SLC39A11Q8N1S5 342 aa17.02■□□□□ 0.32
TPM1-201ENST00000267996 HAUS1Q96CS2 278 aa17.02■□□□□ 0.32
TPM1-201ENST00000267996 PGLYRP2Q96PD5 576 aa17.02■□□□□ 0.32
TPM1-201ENST00000267996 SAE1Q9UBE0 346 aaPredicted RBP17.02■□□□□ 0.32
TPM1-201ENST00000267996 HPCAL4Q9UM19 191 aa17.02■□□□□ 0.32
TPM1-201ENST00000267996 SCML2Q9UQR0 700 aa17.02■□□□□ 0.32
TPM1-201ENST00000267996 FAM92AA1XBS5 289 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 CARNS1A5YM72 827 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 TP73O15350 636 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 CPB1P15086 417 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 PECAM1P16284 738 aaPredicted RBP17.01■□□□□ 0.31
TPM1-201ENST00000267996 TGM2P21980 687 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 ADRA1BP35368 520 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 HSPA9P38646 679 aaKnown RBP17.01■□□□□ 0.31
TPM1-201ENST00000267996 CXCR3P49682 368 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 YWHAGP61981 247 aaKnown RBP eCLIP17.01■□□□□ 0.31
TPM1-201ENST00000267996 NOMO1Q15155 1222 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 DDR2Q16832 855 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 PRSS55Q6UWB4 352 aaPredicted RBP17.01■□□□□ 0.31
TPM1-201ENST00000267996 RNF19BQ6ZMZ0 732 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 C16orf59Q7L2K0 433 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 TMCO2Q7Z6W1 182 aaPredicted RBP17.01■□□□□ 0.31
TPM1-201ENST00000267996 TTC9BQ8N6N2 239 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 PLD5Q8N7P1 536 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 CCDC89Q8N998 374 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 EDEM1Q92611 657 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 ART4Q93070 314 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 ZNF558Q96NG5 402 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 MAGEB5Q9BZ81 275 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 PRDM16Q9HAZ2 1276 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 ABCC13Q9NSE7 274 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 FBXW11Q9UKB1 542 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 ZNF148Q9UQR1 794 aa17.01■□□□□ 0.31
TPM1-201ENST00000267996 PLXNA3P51805 1871 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms