RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 BST1Q10588 318 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 SPOUT1Q5T280 376 aaKnown RBP11.91□□□□□ -0.5
VPS33A-201ENST00000267199 TTC27Q6P3X3 843 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 CYP2R1Q6VVX0 501 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 KATNAL2Q8IYT4 538 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 OR6Y1Q8NGX8 325 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 FAM81AQ8TBF8 368 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 CLPTM1LQ96KA5 538 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 EPAS1Q99814 870 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 KLHL25Q9H0H3 589 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 PLEKHA5Q9HAU0 1116 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 SLC1A6P48664 564 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 PARP6Q2NL67 630 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 CCNJLQ8IV13 435 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 LRRC15Q8TF66 581 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 PDCD6IPQ8WUM4 868 aaKnown RBP11.91□□□□□ -0.5
VPS33A-201ENST00000267199 SEMA4DQ92854 862 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 FRMD8P1Q9BZ68 369 aaPredicted RBP11.91□□□□□ -0.5
VPS33A-201ENST00000267199 COG5Q9UP83 839 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 FSCN2O14926 492 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 STAG3L1P0CL83 205 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 FGFR3P22607 806 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 UGCGQ16739 394 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 CES3Q6UWW8 571 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 CCDC81Q6ZN84 652 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 CLNKQ7Z7G1 428 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 VSIG10LQ86VR7 867 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 VPS33BQ9H267 617 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 TCF7L2Q9NQB0 619 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 DPP3Q9NY33 737 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 SLC17A7Q9P2U7 560 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 UBIAD1Q9Y5Z9 338 aa11.91□□□□□ -0.5
VPS33A-201ENST00000267199 DYNC1LI2O43237 492 aaPredicted RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 TGM2P21980 687 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 SKIV2L2P42285 1042 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 TSPY1Q01534 308 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 CNTN2Q02246 1040 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 LAMTOR4Q0VGL1 99 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 MAMLD1Q13495 774 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 UBAP2LQ14157 1087 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 PDK1Q15118 436 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 SLC1A5Q15758 541 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 KHDC1Q4VXA5 237 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 SEL1L3Q68CR1 1132 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 SNX32Q86XE0 403 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 BRSK2Q8IWQ3 736 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 KYQ8NBH2 561 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 GSTCDQ8NEC7 633 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 OR6J1Q8NGC5 347 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 MECRQ9BV79 373 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 TMEM165Q9HC07 324 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 R3HDM2Q9Y2K5 976 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 SPDYE5A6NIY4 337 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 C3orf70A6NLC5 250 aaPredicted RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 H0Y626 953 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 EEF2KO00418 725 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 TRIM16O95361 564 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 TNFAIP8O95379 198 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 NPTXRO95502 500 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 ALBP02768 609 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 RPS12P25398 132 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 PTGER2P43116 358 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 NCKAP1LP55160 1127 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 DCTN2Q13561 401 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 FASTKD5Q7L8L6 764 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 TMCO5AQ8N6Q1 288 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 ECSITQ9BQ95 431 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 SYNPO2Q9UMS6 1093 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 C2CD2LO14523 706 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 APOA1P02647 267 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 KRT8P05787 483 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 ALADP13716 330 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 ZNF23P17027 643 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 NELFEP18615 380 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 ABCG1P45844 678 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 RPL7AP62424 266 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 PDK3Q15120 406 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 CWF19L1Q69YN2 538 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 TMEM176AQ96HP8 235 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 EML4Q9HC35 981 aaKnown RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 DMAP1Q9NPF5 467 aaPredicted RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 THAP1Q9NVV9 213 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.9□□□□□ -0.5
VPS33A-201ENST00000267199 POLIQ9UNA4 740 aa11.9□□□□□ -0.5
VPS33A-201ENST00000267199 ASTN2O75129 1339 aaPredicted RBP11.9□□□□□ -0.51
VPS33A-201ENST00000267199 MYH8P13535 1937 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 C1orf232A0A0U1RR37 186 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 GSC2O15499 205 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 ESRRBO95718 433 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 GNL1P36915 607 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 RGS2P41220 211 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 HSD17B4P51659 736 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 FKBP1AP62942 108 aaKnown RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 STX5Q13190 355 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 EML3Q32P44 896 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 FUT11Q495W5 492 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 TSHZ1Q6ZSZ6 1077 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 PIGWQ7Z7B1 504 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 SLC7A14Q8TBB6 771 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 WDR60Q8WVS4 1066 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms