RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 SPATA17Q96L03 361 aa10.46□□□□□ -0.73
SYCP3-201ENST00000266743 ZNF560Q96MR9 790 aa10.46□□□□□ -0.73
SYCP3-201ENST00000266743 SYT15Q9BQS2 421 aa10.46□□□□□ -0.73
SYCP3-201ENST00000266743 REEP2Q9BRK0 252 aa10.46□□□□□ -0.73
SYCP3-201ENST00000266743 TIPINQ9BVW5 301 aa10.46□□□□□ -0.73
SYCP3-201ENST00000266743 CPNE5Q9HCH3 593 aa10.46□□□□□ -0.73
SYCP3-201ENST00000266743 TBC1D14Q9P2M4 693 aa10.46□□□□□ -0.73
SYCP3-201ENST00000266743 FTSJ1Q9UET6 329 aa10.46□□□□□ -0.73
SYCP3-201ENST00000266743 CHORDC1Q9UHD1 332 aaPredicted RBP10.46□□□□□ -0.73
SYCP3-201ENST00000266743 STARD13Q9Y3M8 1113 aa10.46□□□□□ -0.73
SYCP3-201ENST00000266743 PCDHB6Q9Y5E3 794 aa10.46□□□□□ -0.73
SYCP3-201ENST00000266743 MUC22E2RYF6 1773 aaPredicted RBP10.46□□□□□ -0.74
SYCP3-201ENST00000266743 MYOFQ9NZM1 2061 aa10.46□□□□□ -0.74
SYCP3-201ENST00000266743 KNL1Q8NG31 2342 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 MYO18AQ92614 2054 aaKnown RBP10.45□□□□□ -0.74
SYCP3-201ENST00000266743 E2F8A0AVK6 867 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 B8ZZF3 427 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 GABRDO14764 452 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 KRT19P08727 400 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 GRK6P43250 576 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 TOB1P50616 345 aaPredicted RBP10.45□□□□□ -0.74
SYCP3-201ENST00000266743 KCNH2Q12809 1159 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 SUZ12Q15022 739 aaKnown RBP10.45□□□□□ -0.74
SYCP3-201ENST00000266743 ARHGAP40Q5TG30 622 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 HES3Q5TGS1 186 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 CSGALNACT2Q8N6G5 542 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 SNIP1Q8TAD8 396 aaKnown RBP10.45□□□□□ -0.74
SYCP3-201ENST00000266743 CXorf38Q8TB03 319 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 SCFD1Q8WVM8 642 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 FUBP3Q96I24 572 aaKnown RBP eCLIP10.45□□□□□ -0.74
SYCP3-201ENST00000266743 TTLL2Q9BWV7 592 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 ZHX3Q9H4I2 956 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 C6orf106Q9H6K1 298 aaPredicted RBP10.45□□□□□ -0.74
SYCP3-201ENST00000266743 CCSER2Q9H7U1 834 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 ITM2CQ9NQX7 267 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 PLK2Q9NYY3 685 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 USP36Q9P275 1121 aaKnown RBP10.45□□□□□ -0.74
SYCP3-201ENST00000266743 LARSQ9P2J5 1176 aaKnown RBP10.45□□□□□ -0.74
SYCP3-201ENST00000266743 AGO2Q9UKV8 859 aaKnown RBP10.45□□□□□ -0.74
SYCP3-201ENST00000266743 ANKRD6Q9Y2G4 727 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 SH3BP1Q9Y3L3 701 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 NME7Q9Y5B8 376 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 STON1Q9Y6Q2 735 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 COL12A1Q99715 3063 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 PIEZO2Q9H5I5 2752 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 CEP192Q8TEP8 1941 aa10.45□□□□□ -0.74
SYCP3-201ENST00000266743 CABIN1Q9Y6J0 2220 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 E9PAM4 449 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 ERVH48-1M5A8F1 160 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 CLDN5O00501 218 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 TRAK2O60296 914 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 TYRP14679 529 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 PFKLP17858 780 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 ANXA13P27216 316 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 PCSK1P29120 753 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 PGFP49763 221 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 PREPLQ4J6C6 727 aaPredicted RBP10.44□□□□□ -0.74
SYCP3-201ENST00000266743 MDH1BQ5I0G3 518 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 C4orf50Q6ZRC1 276 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 TMPRSS6Q8IU80 811 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 TMEM86AQ8N2M4 240 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 CADM4Q8NFZ8 388 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 KBTBD7Q8WVZ9 684 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 BAP1Q92560 729 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 FGF11Q92914 225 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 SAAL1Q96ER3 474 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 PCED1BQ96HM7 432 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 TMEM176AQ96HP8 235 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 FIZ1Q96SL8 496 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.44□□□□□ -0.74
SYCP3-201ENST00000266743 BBS2Q9BXC9 721 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 FAM117AQ9C073 453 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 TM9SF3Q9HD45 589 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 SIX4Q9UIU6 781 aa10.44□□□□□ -0.74
SYCP3-201ENST00000266743 ANAPC1Q9H1A4 1944 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 COL5A1P20908 1838 aaPredicted RBP10.43□□□□□ -0.74
SYCP3-201ENST00000266743 H0YCG3 227 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 ENC1O14682 589 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 FAM13AO94988 1023 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 CISD3P0C7P0 127 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 ADSSP30520 456 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 PNPLA4P41247 253 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 IL12RB1P42701 662 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 LHX1P48742 406 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 CCT8P50990 548 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 AFF3P51826 1226 aaKnown RBP10.43□□□□□ -0.74
SYCP3-201ENST00000266743 ORC2Q13416 577 aaPredicted RBP10.43□□□□□ -0.74
SYCP3-201ENST00000266743 RTP5Q14D33 572 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 TDRD10Q5VZ19 366 aaKnown RBP10.43□□□□□ -0.74
SYCP3-201ENST00000266743 VSTM1Q6UX27 236 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 Q6ZNB5 142 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 HS2ST1Q7LGA3 356 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 PRICKLE2Q7Z3G6 844 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 GPBP1Q86WP2 473 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 ERICH1Q86X53 443 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 DDX42Q86XP3 938 aaKnown RBP eCLIP10.43□□□□□ -0.74
SYCP3-201ENST00000266743 SCAMP5Q8TAC9 235 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 SIPA1Q96FS4 1042 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 FAM213AQ9BRX8 229 aa10.43□□□□□ -0.74
SYCP3-201ENST00000266743 ZNF518BQ9C0D4 1074 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms