RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 APBB2Q92870 758 aa12.93□□□□□ -0.34
BEST3-201ENST00000266661 HPDLQ96IR7 371 aa12.93□□□□□ -0.34
BEST3-201ENST00000266661 NSL1Q96IY1 281 aa12.93□□□□□ -0.34
BEST3-201ENST00000266661 HEXIM2Q96MH2 286 aaKnown RBP12.93□□□□□ -0.34
BEST3-201ENST00000266661 SPATA33Q96N06 139 aa12.93□□□□□ -0.34
BEST3-201ENST00000266661 NUDCD1Q96RS6 583 aa12.93□□□□□ -0.34
BEST3-201ENST00000266661 SLC4A5Q9BY07 1137 aa12.93□□□□□ -0.34
BEST3-201ENST00000266661 RAB6BQ9NRW1 208 aa12.93□□□□□ -0.34
BEST3-201ENST00000266661 PLLPQ9Y342 182 aa12.93□□□□□ -0.34
BEST3-201ENST00000266661 SLC15A5A6NIM6 579 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 TRIM49D1C9J1S8 452 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 H7C0C1 242 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 NOP56O00567 594 aaKnown RBP12.92□□□□□ -0.34
BEST3-201ENST00000266661 ENTPD5O75356 428 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 SLC25A27O95847 323 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 PGK2P07205 417 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 SNRPAP09012 282 aaKnown RBP12.92□□□□□ -0.34
BEST3-201ENST00000266661 SERPINB3P29508 390 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 ATP5OP48047 213 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 YWHAGP61981 247 aaKnown RBP eCLIP12.92□□□□□ -0.34
BEST3-201ENST00000266661 MRPS5P82675 430 aaKnown RBP12.92□□□□□ -0.34
BEST3-201ENST00000266661 CDK18Q07002 472 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 SREBF2Q12772 1141 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 OR6B2Q6IFH4 312 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 DSTYKQ6XUX3 929 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 FASTKD5Q7L8L6 764 aaKnown RBP12.92□□□□□ -0.34
BEST3-201ENST00000266661 TMEM110Q86TL2 294 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 DHX37Q8IY37 1157 aaKnown RBP12.92□□□□□ -0.34
BEST3-201ENST00000266661 KCNV2Q8TDN2 545 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 LRRC39Q96DD0 335 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 NAF1Q96HR8 494 aaKnown RBP12.92□□□□□ -0.34
BEST3-201ENST00000266661 SIGLEC10Q96LC7 697 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 C7orf26Q96N11 449 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 SRPK1Q96SB4 655 aaKnown RBP12.92□□□□□ -0.34
BEST3-201ENST00000266661 TBCBQ99426 244 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 C11orf84Q9BUA3 381 aaPredicted RBP12.92□□□□□ -0.34
BEST3-201ENST00000266661 TXNRD2Q9NNW7 524 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 FBXO6Q9NRD1 293 aaPredicted RBP12.92□□□□□ -0.34
BEST3-201ENST00000266661 ETNK2Q9NVF9 386 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 SIRPGQ9P1W8 387 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 GTF2IRD1Q9UHL9 959 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 TSPAN16Q9UKR8 245 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 SUFUQ9UMX1 484 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 C2CD2Q9Y426 696 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 NME7Q9Y5B8 376 aa12.92□□□□□ -0.34
BEST3-201ENST00000266661 A0A0G2JND7 137 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 A6NHS1 94 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 FAM159BA6NKW6 160 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 CAPN14A8MX76 684 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 MDM4O15151 490 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 KCNN4O15554 427 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 PRPSAP2O60256 369 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 SMNDC1O75940 238 aaKnown RBP eCLIP12.91□□□□□ -0.34
BEST3-201ENST00000266661 P4HA1P13674 534 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 OCRLQ01968 901 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 NAA25Q14CX7 972 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 TAF1CQ15572 869 aaPredicted RBP12.91□□□□□ -0.34
BEST3-201ENST00000266661 KHDC1Q4VXA5 237 aaKnown RBP12.91□□□□□ -0.34
BEST3-201ENST00000266661 TEX44Q53QW1 395 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 PMF1Q6P1K2 205 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 TTC39CQ8N584 583 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 SNRNP25Q9BV90 132 aaKnown RBP12.91□□□□□ -0.34
BEST3-201ENST00000266661 MIS12Q9H081 205 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 GPATCH2LQ9NWQ4 482 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 WBP1LQ9NX94 342 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 TAS2R1Q9NYW7 299 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 RBPJLQ9UBG7 517 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 CPA4Q9UI42 421 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 ITGA11Q9UKX5 1188 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 A0A087WZ62 844 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 APOL1O14791 398 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 UGT1A9O60656 530 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 CSDE1O75534 798 aaKnown RBP12.91□□□□□ -0.34
BEST3-201ENST00000266661 GCATO75600 419 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 LMNAP02545 664 aaKnown RBP12.91□□□□□ -0.34
BEST3-201ENST00000266661 APOEP02649 317 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 RARBP10826 455 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 ARF4P18085 180 aaPredicted RBP12.91□□□□□ -0.34
BEST3-201ENST00000266661 PHKA2P46019 1235 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 GCLCP48506 637 aaPredicted RBP12.91□□□□□ -0.34
BEST3-201ENST00000266661 CAP1Q01518 475 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 TMEM132DQ14C87 1099 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 STILQ15468 1287 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 KYAT1Q16773 422 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 Q3C1V9 767 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 ZNF484Q5JVG2 852 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 SYCP2LQ5T4T6 812 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 C4orf22Q6V702 233 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 UNC5AQ6ZN44 842 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 RINLQ6ZS11 566 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 CYS1Q717R9 158 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 ANKRD23Q86SG2 305 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 TTC30AQ86WT1 665 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 MAP7D3Q8IWC1 876 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 FBXO16Q8IX29 292 aaPredicted RBP12.91□□□□□ -0.34
BEST3-201ENST00000266661 SLC35F5Q8WV83 523 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 TTC17Q96AE7 1141 aa12.91□□□□□ -0.34
BEST3-201ENST00000266661 OXNAD1Q96HP4 312 aaPredicted RBP12.91□□□□□ -0.34
BEST3-201ENST00000266661 FDXACB1Q9BRP7 624 aaPredicted RBP12.91□□□□□ -0.34
BEST3-201ENST00000266661 ZNF670Q9BS34 389 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms