RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 TUBP50607 506 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 CDK7P50613 346 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 SMAD3P84022 425 aaKnown RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 GPR17Q13304 367 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 CUL1Q13616 776 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 BYSLQ13895 437 aaKnown RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 ZRSR2Q15696 482 aaKnown RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 ZC3H12AQ5D1E8 599 aaKnown RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 SPOCD1Q6ZMY3 1216 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 SYDE1Q6ZW31 735 aaPredicted RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 LGI2Q8N0V4 545 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 USP33Q8TEY7 942 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 PIK3R5Q8WYR1 880 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 TOP1MTQ969P6 601 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 XPO6Q96QU8 1125 aaKnown RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 B3GNT5Q9BYG0 378 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 TTYH3Q9C0H2 523 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 BFARQ9NZS9 450 aa8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 TTC7AQ9ULT0 858 aaPredicted RBP8.59□□□□□ -1.03
GTF3C3-201ENST00000263956 PSME4Q14997 1843 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 PHF2O75151 1096 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 EZRP15311 586 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 KRT15P19012 456 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 CHKAP35790 457 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 PPP3CCP48454 512 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 ADAM17P78536 824 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 THOC5Q13769 683 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 SLMAPQ14BN4 828 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 C15orf59Q2T9L4 293 aaPredicted RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 P3H1Q32P28 736 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 CLLU1OSQ5K130 101 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 SMYD5Q6GMV2 418 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 PDE12Q6L8Q7 609 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 PMF1Q6P1K2 205 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 LZTR1Q8N653 840 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 MS4A14Q96JA4 679 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 PAIP2Q9BPZ3 127 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 MAGEB5Q9BZ81 275 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 XYLT2Q9H1B5 865 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 KCNK9Q9NPC2 374 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 GMIPQ9P107 970 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 RSPH14Q9UHP6 348 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 GRIN2DO15399 1336 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 ZNF185O15231 689 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 CTNNA1P35221 906 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 ARSEP51690 589 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 DEFB103AP81534 67 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 SLC7A5Q01650 507 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 MGAT3Q09327 533 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 INCA1Q0VD86 236 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 DSC3Q14574 896 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 PREPLQ4J6C6 727 aaPredicted RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 GPR158Q5T848 1215 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 HGSNATQ68CP4 663 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 OSTM1Q86WC4 334 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 ZNF461Q8TAF7 563 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 CSGALNACT1Q8TDX6 532 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 RIPOR3Q96MK2 946 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 GDAP1L1Q96MZ0 367 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 VPS28Q9UK41 221 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 FNDC3AQ9Y2H6 1198 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 A0A1W2PQH9 124 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 C3orf70A6NLC5 250 aaPredicted RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 SLC38A8A6NNN8 435 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 TSPAN3O60637 253 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 ZMYND10O75800 440 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 GJB5O95377 273 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 PPARGP37231 505 aaPredicted RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 KRT71Q3SY84 523 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 C4orf22Q6V702 233 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 COLGALT2Q8IYK4 626 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 TFB1MQ8WVM0 346 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 RMDN1Q96DB5 314 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 ASIC4Q96FT7 647 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 FMO2Q99518 471 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 SELENOSQ9BQE4 189 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 NOCTQ9UK39 431 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 TBX21Q9UL17 535 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 MRFAP1Q9Y605 127 aa8.58□□□□□ -1.04
GTF3C3-201ENST00000263956 F8W8V4 182 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 PRLRP16471 622 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 STIP1P31948 543 aaKnown RBP8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 EPHB4P54760 987 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 ACBD5Q5T8D3 534 aaPredicted RBP8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 MEI1Q5TIA1 1274 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 TIGD7Q6NT04 549 aaPredicted RBP8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 SLC26A9Q7LBE3 791 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 PYROXD1Q8WU10 500 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 TWNKQ96RR1 684 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 GPR62Q9BZJ7 368 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 ABCB6Q9NP58 842 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 NKIRAS1Q9NYS0 192 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 PAK5Q9P286 719 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 HMGXB4Q9UGU5 601 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 YIPF1Q9Y548 306 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 NCANO14594 1321 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 MYH9P35579 1960 aaKnown RBP8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 AP3B1O00203 1094 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 NCAM2O15394 837 aa8.57□□□□□ -1.04
GTF3C3-201ENST00000263956 TBC1D4O60343 1298 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms