RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PNPLA8Q9NP80 782 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 IL37Q9NZH6 218 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 HOOK1Q9UJC3 728 aaKnown RBP12.89□□□□□ -0.35
TRAF4-202ENST00000262396 HPSEQ9Y251 543 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 ZNF510Q9Y2H8 683 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 ATXN2Q99700 1313 aaKnown RBP12.88□□□□□ -0.35
TRAF4-202ENST00000262396 A0A0A0MRY4 1105 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 FAM92AA1XBS5 289 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 PATE3B3GLJ2 98 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 MDM4O15151 490 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 CILPO75339 1184 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 ZNF202O95125 648 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 GTF2H1P32780 548 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 RDXP35241 583 aaKnown RBP12.88□□□□□ -0.35
TRAF4-202ENST00000262396 CHKAP35790 457 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 YWHAEP62258 255 aaKnown RBP12.88□□□□□ -0.35
TRAF4-202ENST00000262396 IRX4P78413 519 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 GFPT1Q06210 699 aaPredicted RBP12.88□□□□□ -0.35
TRAF4-202ENST00000262396 PPP3CAQ08209 521 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 INCA1Q0VD86 236 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 MESP2Q0VG99 397 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 EFEMP1Q12805 493 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 DPYDQ12882 1025 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 SH3PXD2AQ5TCZ1 1133 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 GPRIN1Q7Z2K8 1008 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 RABEPKQ7Z6M1 372 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 ETFBKMTQ8IXQ9 262 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 TWNKQ96RR1 684 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 DUSP16Q9BY84 665 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 CYLDQ9NQC7 956 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 PLK2Q9NYY3 685 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 CALCOCO1Q9P1Z2 691 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 HESX1Q9UBX0 185 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 CYP8B1Q9UNU6 501 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 ANAPC1Q9H1A4 1944 aa12.88□□□□□ -0.35
TRAF4-202ENST00000262396 A0A1W2PQ27 194 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 A0A1W2PQ64 194 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 A0A1W2PQD8 194 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 SYNCRIPO60506 623 aaKnown RBP12.87□□□□□ -0.35
TRAF4-202ENST00000262396 ADAM23O75077 832 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 SMC2O95347 1197 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 HNRNPLP14866 589 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRAF4-202ENST00000262396 CD19P15391 556 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 PTGER3P43115 390 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 STIM1Q13586 685 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 NFIL3Q16649 462 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 SPDYCQ5MJ68 293 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 SYCP2LQ5T4T6 812 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 PPP1R26Q5T8A7 1209 aaPredicted RBP12.87□□□□□ -0.35
TRAF4-202ENST00000262396 EGFLAMQ63HQ2 1017 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 FBXL13Q8NEE6 735 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 OLIG1Q8TAK6 271 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 CEP76Q8TAP6 659 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 RNF139Q8WU17 664 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 WBP2Q969T9 261 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 EEF2KMTQ96G04 330 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 TMEM176AQ96HP8 235 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 IPO9Q96P70 1041 aaKnown RBP12.87□□□□□ -0.35
TRAF4-202ENST00000262396 NMUR1Q9HB89 426 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 LRRC4Q9HBW1 653 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 APOBEC3GQ9HC16 384 aaKnown RBP12.87□□□□□ -0.35
TRAF4-202ENST00000262396 CISHQ9NSE2 258 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRAF4-202ENST00000262396 RAB20Q9NX57 234 aa12.87□□□□□ -0.35
TRAF4-202ENST00000262396 HELZP42694 1942 aaKnown RBP12.87□□□□□ -0.35
TRAF4-202ENST00000262396 SPAG17Q6Q759 2223 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 GREB1Q4ZG55 1949 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 SLC12A8A0AV02 714 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 TRIM24O15164 1050 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 CACNG3O60359 315 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 ACADMP11310 421 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 GNSP15586 552 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 ENGP17813 658 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 ITPKAP23677 461 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 CORO1AP31146 461 aaKnown RBP12.86□□□□□ -0.35
TRAF4-202ENST00000262396 KIF11P52732 1056 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 ENPEPQ07075 957 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 DUOXA1Q1HG43 343 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 EDRF1Q3B7T1 1238 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 KLHDC10Q6PID8 442 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 CCDC186Q7Z3E2 898 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 SMYD4Q8IYR2 804 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-202ENST00000262396 FRMD1Q8N878 549 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 IPO4Q8TEX9 1081 aaKnown RBP12.86□□□□□ -0.35
TRAF4-202ENST00000262396 DDI1Q8WTU0 396 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 DUSP9Q99956 384 aaKnown RBP12.86□□□□□ -0.35
TRAF4-202ENST00000262396 CIPCQ9C0C6 399 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 GDPD2Q9HCC8 539 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 OSER1Q9NX31 292 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 CACNA2D2Q9NY47 1150 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 CLIC5Q9NZA1 410 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 MARCH2Q9P0N8 246 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 EVLQ9UI08 416 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-202ENST00000262396 SLC6A14Q9UN76 642 aa12.86□□□□□ -0.35
TRAF4-202ENST00000262396 MEI4A8MW99 385 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 TM4SF5O14894 197 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 OPHN1O60890 802 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 KRT37O76014 449 aa12.85□□□□□ -0.35
TRAF4-202ENST00000262396 STC2O76061 302 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms