RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 COL1A2P08123 1366 aa23.47■■□□□ 1.35
MCF2L-201ENST00000261963 RBM47A0AV96 593 aaKnown RBP23.46■■□□□ 1.35
MCF2L-201ENST00000261963 CAPN9O14815 690 aa23.46■■□□□ 1.35
MCF2L-201ENST00000261963 CCDC22O60826 627 aa23.46■■□□□ 1.35
MCF2L-201ENST00000261963 KRT36O76013 467 aa23.46■■□□□ 1.35
MCF2L-201ENST00000261963 ADORA2AP29274 412 aa23.46■■□□□ 1.35
MCF2L-201ENST00000261963 PHBP35232 272 aa23.46■■□□□ 1.35
MCF2L-201ENST00000261963 SERPINB4P48594 390 aa23.46■■□□□ 1.35
MCF2L-201ENST00000261963 BBS9Q3SYG4 887 aa23.46■■□□□ 1.35
MCF2L-201ENST00000261963 EMID1Q96A84 441 aaPredicted RBP23.46■■□□□ 1.35
MCF2L-201ENST00000261963 KIF12Q96FN5 646 aa23.46■■□□□ 1.35
MCF2L-201ENST00000261963 VTA1Q9NP79 307 aa23.46■■□□□ 1.35
MCF2L-201ENST00000261963 C2CD2LO14523 706 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 CA4P22748 312 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 GSTT1P30711 240 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 RGS7P49802 495 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 BASP1P80723 227 aaKnown RBP23.45■■□□□ 1.35
MCF2L-201ENST00000261963 AP1B1Q10567 949 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 MARCH8Q5T0T0 291 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 FAM182AQ5T1J6 154 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 ADGRD1Q6QNK2 874 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 CCNJLQ8IV13 435 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 ARHGAP18Q8N392 663 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 MZB1Q8WU39 189 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 PAFAH2Q99487 392 aa23.45■■□□□ 1.35
MCF2L-201ENST00000261963 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.45■■□□□ 1.34
MCF2L-201ENST00000261963 ROR1Q01973 937 aa23.45■■□□□ 1.34
MCF2L-201ENST00000261963 KPNB1Q14974 876 aaKnown RBP23.45■■□□□ 1.34
MCF2L-201ENST00000261963 CDO1Q16878 200 aa23.45■■□□□ 1.34
MCF2L-201ENST00000261963 GOLGA7BQ2TAP0 167 aa23.45■■□□□ 1.34
MCF2L-201ENST00000261963 CCDC14Q49A88 953 aa23.45■■□□□ 1.34
MCF2L-201ENST00000261963 CLNKQ7Z7G1 428 aa23.45■■□□□ 1.34
MCF2L-201ENST00000261963 MTDHQ86UE4 582 aaKnown RBP23.45■■□□□ 1.34
MCF2L-201ENST00000261963 IGDCC3Q8IVU1 814 aa23.45■■□□□ 1.34
MCF2L-201ENST00000261963 KIAA1257Q9ULG3 409 aa23.45■■□□□ 1.34
MCF2L-201ENST00000261963 PDLIM1O00151 329 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 MAP3K7O43318 606 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 ZWINTO95229 277 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 PSMG1O95456 288 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 KRT4P19013 534 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 ACSBG2Q5FVE4 666 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 PDIK1LQ8N165 341 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 BTBD10Q9BSF8 475 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 FAM124BQ9H5Z6 455 aaPredicted RBP23.44■■□□□ 1.34
MCF2L-201ENST00000261963 NME7Q9Y5B8 376 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 H3BRB1 525 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 PPEF2O14830 753 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 IL4RP24394 825 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 GRM5P41594 1212 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 SNAPC2Q13487 334 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 GSTA3Q16772 222 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 CTC1Q2NKJ3 1217 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 PKDCCQ504Y2 493 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 PPP1R26Q5T8A7 1209 aaPredicted RBP23.44■■□□□ 1.34
MCF2L-201ENST00000261963 FYB2Q5VWT5 728 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 PMF1Q6P1K2 205 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 DARS2Q6PI48 645 aaKnown RBP23.44■■□□□ 1.34
MCF2L-201ENST00000261963 TTC30AQ86WT1 665 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 GPRC5AQ8NFJ5 357 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 MRPL45Q9BRJ2 306 aaKnown RBP23.44■■□□□ 1.34
MCF2L-201ENST00000261963 TUT1Q9H6E5 874 aaKnown RBP23.44■■□□□ 1.34
MCF2L-201ENST00000261963 CYLDQ9NQC7 956 aa23.44■■□□□ 1.34
MCF2L-201ENST00000261963 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.43■■□□□ 1.34
MCF2L-201ENST00000261963 PRPSAP2O60256 369 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 FGFR1P11362 822 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 STIP1P31948 543 aaKnown RBP23.43■■□□□ 1.34
MCF2L-201ENST00000261963 OLFML1Q6UWY5 402 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 OTOAQ7RTW8 1153 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 NT5DC4Q86YG4 428 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 DCAKDQ8WVC6 231 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 KHSRPQ92945 711 aaKnown RBP eCLIP23.43■■□□□ 1.34
MCF2L-201ENST00000261963 STMN2Q93045 179 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 RNF157Q96PX1 679 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 VCX3BQ9H321 246 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 VCX3AQ9NNX9 186 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 SSU72Q9NP77 194 aaKnown RBP23.43■■□□□ 1.34
MCF2L-201ENST00000261963 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.43■■□□□ 1.34
MCF2L-201ENST00000261963 CREB3O43889 395 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 TBX10O75333 385 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 KCNJ11Q14654 390 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 GRIK4Q16099 956 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 KLHL38Q2WGJ6 581 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 PALM2Q8IXS6 379 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 TTC39CQ8N584 583 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 ZMAT2Q96NC0 199 aaKnown RBP23.43■■□□□ 1.34
MCF2L-201ENST00000261963 TUBB6Q9BUF5 446 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 UBE2OQ9C0C9 1292 aaKnown RBP23.43■■□□□ 1.34
MCF2L-201ENST00000261963 USP29Q9HBJ7 922 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 GPATCH2LQ9NWQ4 482 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 STX18Q9P2W9 335 aaKnown RBP23.43■■□□□ 1.34
MCF2L-201ENST00000261963 CHMP2BQ9UQN3 213 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 PLXNA1Q9UIW2 1896 aa23.43■■□□□ 1.34
MCF2L-201ENST00000261963 GSC2O15499 205 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 TFDP2Q14188 446 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 C1orf228Q6PIY5 440 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 ZNF398Q8TD17 642 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 NPHS2Q9NP85 383 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 LMCD1Q9NZU5 365 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 DPYSL4O14531 572 aa23.42■■□□□ 1.34
MCF2L-201ENST00000261963 GABBR2O75899 941 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms