RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 C12orf56Q8IXR9 622 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 DAW1Q8N136 415 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 NDUFAF2Q8N183 169 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 SLC35B2Q8TB61 432 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 FEZF2Q8TBJ5 459 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 BORCS5Q969J3 196 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ZNF512Q96ME7 567 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 RANBP9Q96S59 729 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 STN1Q9H668 368 aaKnown RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 TOPORSQ9NS56 1045 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 WRAP73Q9P2S5 460 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-201ENST00000261443 RIMS3Q9UJD0 308 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 ZNRF3Q9ULT6 936 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 AGTPBP1Q9UPW5 1226 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 SQORQ9Y6N5 450 aa7.48□□□□□ -1.21
CSDE1-201ENST00000261443 LTBP1Q14766 1721 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 THSD7AQ9UPZ6 1657 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 LSM1O15116 133 aaKnown RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 FAM189A1O60320 539 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 H6PDO95479 791 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 L1CAMP32004 1257 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 ZFP1Q6P2D0 407 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 ARCQ7LC44 396 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 TMEM110Q86TL2 294 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 ZNF677Q86XU0 584 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 TRPC4APQ8TEL6 797 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 POMGNT1Q8WZA1 660 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 HSPH1Q92598 858 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 THAP11Q96EK4 314 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 SNX27Q96L92 541 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 ZNF778Q96MU6 729 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 WRNIP1Q96S55 665 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 HEPHQ9BQS7 1158 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 NEURL2Q9BR09 285 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 GPATCH1Q9BRR8 931 aaKnown RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 ARMC7Q9H6L4 198 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 ANLNQ9NQW6 1124 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 SLC38A7Q9NVC3 462 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 TUBA8Q9NY65 449 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 COQ4Q9Y3A0 265 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 SPTLC1O15269 473 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 DCXO43602 365 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 SPAG6O75602 509 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 RFPL1O75677 317 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 FUCA1P04066 466 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 CFHP08603 1231 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 COX4I1P13073 169 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 NELFEP18615 380 aaKnown RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 NFKBIAP25963 317 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 PRDX6P30041 224 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 CDKN2BP42772 138 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 EIF2B2P49770 351 aaKnown RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 IDH3AP50213 366 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 PRELPP51888 382 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 C21orf59P57076 290 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 RPL7AP62424 266 aaKnown RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 OTUD4Q01804 1114 aaKnown RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 FLOT2Q14254 428 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 TBC1D10BQ4KMP7 808 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 PLEKHA7Q6IQ23 1121 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 RWDD4Q6NW29 188 aaKnown RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 SLC2A7Q6PXP3 512 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 CLVS1Q8IUQ0 354 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 CENPSQ8N2Z9 138 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 SCAIQ8N9R8 606 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 ACTL9Q8TC94 416 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 KCNN1Q92952 543 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 ITPKCQ96DU7 683 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 AGAP3Q96P47 875 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 SERPINI1Q99574 410 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 PKP2Q99959 881 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 SLC2A11Q9BYW1 496 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 INO80BQ9C086 356 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 TRPC7Q9HCX4 862 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 PARVAQ9NVD7 372 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 TRNAU1APQ9NX07 287 aaKnown RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 STK39Q9UEW8 545 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 EBF1Q9UH73 591 aa7.47□□□□□ -1.21
CSDE1-201ENST00000261443 GPC6Q9Y625 555 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-201ENST00000261443 K7EPI3 171 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 SOCS7O14512 581 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 GAS7O60861 476 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 ZBTB11O95625 1053 aaPredicted RBP7.46□□□□□ -1.21
CSDE1-201ENST00000261443 P4HBP07237 508 aaKnown RBP7.46□□□□□ -1.21
CSDE1-201ENST00000261443 CDH3P22223 829 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 PAX3P23760 479 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 SLC1A6P48664 564 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 RHBDL3P58872 404 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 ESRRGP62508 458 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 ATP1A4Q13733 1029 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 ZNF829Q3KNS6 432 aaPredicted RBP7.46□□□□□ -1.21
CSDE1-201ENST00000261443 FASTKD1Q53R41 847 aaKnown RBP7.46□□□□□ -1.21
CSDE1-201ENST00000261443 PLA2G4FQ68DD2 849 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 TXNRD3NBQ6F5E7 133 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 THOC7Q6I9Y2 204 aaKnown RBP7.46□□□□□ -1.21
CSDE1-201ENST00000261443 KRT80Q6KB66 452 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 C16orf87Q6PH81 154 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 PADI6Q6TGC4 694 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 ENOSF1Q7L5Y1 443 aa7.46□□□□□ -1.21
CSDE1-201ENST00000261443 GPR141Q7Z602 305 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms