RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CATSPER2Q96P56 530 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 PABPC3Q9H361 631 aaKnown RBP12.45□□□□□ -0.42
COL8A1-201ENST00000261037 GPAMQ9HCL2 828 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 TRPM5Q9NZQ8 1165 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 GLP2RO95838 553 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 GCLCP48506 637 aaPredicted RBP12.45□□□□□ -0.42
COL8A1-201ENST00000261037 PPP4CP60510 307 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 POU6F1Q14863 301 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 PHKG1Q16816 387 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 KRT78Q8N1N4 520 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 WHRNQ9P202 907 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 DCDC2CA8MYV0 355 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 AGRPO00253 132 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 DLGAP3O95886 979 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 EPHB3P54753 998 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 PGM5Q15124 567 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 MTDHQ86UE4 582 aaKnown RBP12.45□□□□□ -0.42
COL8A1-201ENST00000261037 TXNRD3Q86VQ6 643 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 CACUL1Q86Y37 369 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 ANKRD49Q8WVL7 239 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 WDR27A2RRH5 827 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 AKAP3O75969 853 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 PCDH8O95206 1070 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 STX5Q13190 355 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 ANKS6Q68DC2 871 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 RD3Q7Z3Z2 195 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 LRRC6Q86X45 466 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 ADAM32Q8TC27 787 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 TRAPPC12Q8WVT3 735 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 PPP1R10Q96QC0 940 aaKnown RBP12.45□□□□□ -0.42
COL8A1-201ENST00000261037 RNF19AQ9NV58 838 aa12.45□□□□□ -0.42
COL8A1-201ENST00000261037 A8MX80 341 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 RGS5O15539 181 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 FGFR1P11362 822 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 ITGALP20701 1170 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 EPHX2P34913 555 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 ALDH9A1P49189 494 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 CCDC15Q0P6D6 951 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 BST2Q10589 180 aaKnown RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 ATP6AP1LQ52LC2 224 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 SEL1L3Q68CR1 1132 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 ZNF720Q7Z2F6 126 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 BNIPLQ7Z465 357 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 KRT84Q9NSB2 600 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 MGAT4DA6NG13 374 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 BAIAP3O94812 1187 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 GSTM1P09488 218 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 KBTBD12Q3ZCT8 623 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 BNC2Q6ZN30 1099 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 FGD2Q7Z6J4 655 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 CD302Q8IX05 232 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 GMCL1P1Q8NEA9 526 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 STARD7Q9NQZ5 370 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 MICAL2O94851 1124 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 CRTAMO95727 393 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 ERVK-10P10266 1014 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 RRM2P31350 389 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 ADIGQ0VDE8 80 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 GRIK4Q16099 956 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 SNRNP27Q8WVK2 155 aaKnown RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 GLMNQ92990 594 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 PHF21BQ96EK2 531 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 VANGL2Q9ULK5 521 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 LOC102724159A0A0B4J2E5 919 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 TIMM44O43615 452 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 NQO1P15559 274 aaKnown RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 GARTP22102 1010 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 PWP2Q15269 919 aaKnown RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 KHDRBS2Q5VWX1 349 aaKnown RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 CES3Q6UWW8 571 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 NYAP1Q6ZVC0 841 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 SUGP1Q8IWZ8 645 aaKnown RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 PPP1R13LQ8WUF5 828 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 ZDHHC15Q96MV8 337 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 FRMD8P1Q9BZ68 369 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 TDRKHQ9Y2W6 561 aaKnown RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 RNASEH1O60930 286 aaKnown RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 LTFP02788 710 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 THRAP10827 490 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 CCNG1P51959 295 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 PTPN11Q06124 597 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 TTI2Q6NXR4 508 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 TRAF7Q6Q0C0 670 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 C16orf59Q7L2K0 433 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 SCUBE1Q8IWY4 988 aa12.44□□□□□ -0.42
COL8A1-201ENST00000261037 KCTD14Q9BQ13 255 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 STN1Q9H668 368 aaKnown RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 DMAP1Q9NPF5 467 aaPredicted RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 ADARB2Q9NS39 739 aaKnown RBP12.44□□□□□ -0.42
COL8A1-201ENST00000261037 KIF20BQ96Q89 1820 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 CYP7B1O75881 506 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 ACADMP11310 421 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 MAPK1P28482 360 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 LHX1P48742 406 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 TRAF2Q12933 501 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 TADA1Q96BN2 335 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 KRCC1Q9NPI7 259 aaPredicted RBP12.43□□□□□ -0.42
COL8A1-201ENST00000261037 SPACA6W5XKT8 324 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 PROSCO94903 275 aa12.43□□□□□ -0.42
COL8A1-201ENST00000261037 NDST1P52848 882 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms