RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 SLC1A6P48664 564 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 COG7P83436 770 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 MYBPC1Q00872 1141 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 LMBRD2Q68DH5 695 aaPredicted RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 PDPK2PQ6A1A2 396 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 DUS1LQ6P1R4 473 aaKnown RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 ZFP1Q6P2D0 407 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 RFX6Q8HWS3 928 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 ADCY4Q8NFM4 1077 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 FNDC8Q8TC99 324 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 PPP4R1Q8TF05 950 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 FAF2Q96CS3 445 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 FAM84AQ96KN4 292 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 PRPF18Q99633 342 aaKnown RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 APOBEC3GQ9HC16 384 aaKnown RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 AGO4Q9HCK5 861 aaKnown RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 BCAP29Q9UHQ4 241 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 PAIP2BQ9ULR5 123 aaKnown RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 STAM2O75886 525 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 VNN1O95497 513 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 PSMA2P25787 234 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 ABCD1P33897 745 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 GABRB2P47870 512 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 YWHAZP63104 245 aaKnown RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 ROR1Q01973 937 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 CBX3Q13185 183 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 SMTNL2Q2TAL5 461 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 FASTKD1Q53R41 847 aaKnown RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 DNAJC14Q6Y2X3 702 aaPredicted RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 ERI1Q8IV48 349 aaKnown RBP11.9□□□□□ -0.5
TROAP-201ENST00000257909 SEPT12Q8IYM1 358 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 CNBD2Q96M20 576 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 ZDHHC15Q96MV8 337 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 HAUS8Q9BT25 410 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 IDI2Q9BXS1 227 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 TBC1D22BQ9NU19 505 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 TMOD2Q9NZR1 351 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 PCDHAC2Q9Y5I4 1007 aa11.9□□□□□ -0.5
TROAP-201ENST00000257909 KDM4FA0A1W2PPD8 638 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 GH2P01242 217 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 APOEP02649 317 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 CDH2P19022 906 aaPredicted RBP11.89□□□□□ -0.51
TROAP-201ENST00000257909 CNTFP26441 200 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 PCSK6P29122 969 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 IDH3AP50213 366 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 ZNF132P52740 706 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 BMPR2Q13873 1038 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 LPIN1Q14693 890 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 FSCBQ5H9T9 825 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 SH3D19Q5HYK7 790 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 TEDDM1Q5T9Z0 273 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 MBLAC2Q68D91 279 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 TIFABQ6ZNK6 161 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 FAM196AQ6ZSG2 479 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 SPATA18Q8TC71 538 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 CHURC1Q8WUH1 139 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 PRPF31Q8WWY3 499 aaKnown RBP11.89□□□□□ -0.51
TROAP-201ENST00000257909 LRRC39Q96DD0 335 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 ZNF778Q96MU6 729 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 SERPINI1Q99574 410 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 RTKNQ9BST9 563 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 IFT122Q9HBG6 1241 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 POPDC2Q9HBU9 364 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 PCDH18Q9HCL0 1135 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 FAIMQ9NVQ4 179 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 STK39Q9UEW8 545 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 APPL1Q9UKG1 709 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 E9PBE3 544 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 AVILO75366 819 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 LRCH4O75427 683 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 ALOX15P16050 662 aaPredicted RBP11.89□□□□□ -0.51
TROAP-201ENST00000257909 OSBPP22059 807 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 CD97P48960 835 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 SPP2Q13103 211 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 ADGRE1Q14246 886 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 UGCGQ16739 394 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 DARS2Q6PI48 645 aaKnown RBP11.89□□□□□ -0.51
TROAP-201ENST00000257909 TRIM67Q6ZTA4 783 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 FRMD7Q6ZUT3 714 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 SH3BP5LQ7L8J4 393 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 BBS5Q8N3I7 341 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 KCTD6Q8NC69 237 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 TFB1MQ8WVM0 346 aaKnown RBP11.89□□□□□ -0.51
TROAP-201ENST00000257909 RSPH1Q8WYR4 309 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 DEFB129Q9H1M3 183 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 PAK5Q9P286 719 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 FAM198AQ9UFP1 575 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 RSL24D1Q9UHA3 163 aaKnown RBP11.89□□□□□ -0.51
TROAP-201ENST00000257909 PRPF19Q9UMS4 504 aaKnown RBP11.89□□□□□ -0.51
TROAP-201ENST00000257909 CEPT1Q9Y6K0 416 aa11.89□□□□□ -0.51
TROAP-201ENST00000257909 TMEM221A6NGB7 291 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 ITM2AO43736 263 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 NPM3O75607 178 aaKnown RBP11.88□□□□□ -0.51
TROAP-201ENST00000257909 FBXO21O94952 628 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 GRK2P25098 689 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 IL1R2P27930 398 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 JAK3P52333 1124 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 CACNB3P54284 484 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 TKFCQ3LXA3 575 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 KCNT1Q5JUK3 1230 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms