RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FNIP1Q8TF40 1166 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 SMARCD2Q92925 531 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 FAM149B1Q96BN6 582 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 ACSF2Q96CM8 615 aaPredicted RBP14.75□□□□□ -0.05
VPS25-201ENST00000253794 PGAP3Q96FM1 320 aaPredicted RBP14.75□□□□□ -0.05
VPS25-201ENST00000253794 ZFRQ96KR1 1074 aaKnown RBP14.75□□□□□ -0.05
VPS25-201ENST00000253794 ZSWIM3Q96MP5 696 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 SLC22A12Q96S37 553 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 RNF38Q9H0F5 515 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 THAP2Q9H0W7 228 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 MRPL47Q9HD33 250 aaKnown RBP14.75□□□□□ -0.05
VPS25-201ENST00000253794 LUC7LQ9NQ29 371 aaKnown RBP14.75□□□□□ -0.05
VPS25-201ENST00000253794 METTL5Q9NRN9 209 aaKnown RBP14.75□□□□□ -0.05
VPS25-201ENST00000253794 CNOT8Q9UFF9 292 aaKnown RBP14.75□□□□□ -0.05
VPS25-201ENST00000253794 DNMT3LQ9UJW3 386 aa14.75□□□□□ -0.05
VPS25-201ENST00000253794 NUP210Q8TEM1 1887 aaPredicted RBP14.75□□□□□ -0.05
VPS25-201ENST00000253794 UNC80Q8N2C7 3258 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 LOC730098B7Z3J9 87 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 ANHXE9PGG2 379 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 GOLGA8SH3BPF8 625 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 DPYSL4O14531 572 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 ENDOD1O94919 500 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 NCAM1P13591 858 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 IL9P15248 144 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 FLT3P36888 993 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 AVPR1AP37288 418 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 PTPN9P43378 593 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 SPA17Q15506 151 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 FAM78AQ5JUQ0 283 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 C10orf120Q5SQS8 335 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 SYPL2Q5VXT5 272 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 TRNP1Q6NT89 227 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 DNAAF5Q86Y56 855 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 PLCD3Q8N3E9 789 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 ARL14EPQ8N8R7 260 aaPredicted RBP14.74□□□□□ -0.05
VPS25-201ENST00000253794 TDRD5Q8NAT2 981 aaKnown RBP14.74□□□□□ -0.05
VPS25-201ENST00000253794 ZSCAN18Q8TBC5 510 aaPredicted RBP14.74□□□□□ -0.05
VPS25-201ENST00000253794 DQX1Q8TE96 717 aaKnown RBP14.74□□□□□ -0.05
VPS25-201ENST00000253794 RNF139Q8WU17 664 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 CTNNBL1Q8WYA6 563 aaPredicted RBP14.74□□□□□ -0.05
VPS25-201ENST00000253794 EDEM1Q92611 657 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 E2F7Q96AV8 911 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 NPY6RQ99463 290 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 SELENOOQ9BVL4 669 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 KLF16Q9BXK1 252 aaPredicted RBP14.74□□□□□ -0.05
VPS25-201ENST00000253794 PACSIN1Q9BY11 444 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 TRPC7Q9HCX4 862 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.74□□□□□ -0.05
VPS25-201ENST00000253794 UVRAGQ9P2Y5 699 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 NAALADL1Q9UQQ1 740 aa14.74□□□□□ -0.05
VPS25-201ENST00000253794 REXO2Q9Y3B8 237 aaKnown RBP14.74□□□□□ -0.05
VPS25-201ENST00000253794 HBS1LQ9Y450 684 aaKnown RBP14.74□□□□□ -0.05
VPS25-201ENST00000253794 TMEM191CA6NGB0 347 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 C2CD4DB7Z1M9 353 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 CAPN9O14815 690 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 PJA2O43164 708 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 NRDCO43847 1150 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 ECI2O75521 394 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 MTA2O94776 668 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 IPO7O95373 1038 aaKnown RBP14.73□□□□□ -0.05
VPS25-201ENST00000253794 PRAMEF12O95522 483 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 TBX18O95935 607 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 ABL1P00519 1130 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 IGLV3-27P01718 113 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 CKMP06732 381 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 ABCB4P21439 1286 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 GBP2P32456 591 aaPredicted RBP14.73□□□□□ -0.05
VPS25-201ENST00000253794 RFC1P35251 1148 aaPredicted RBP14.73□□□□□ -0.05
VPS25-201ENST00000253794 MAGEA1P43355 309 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 KCNQ1P51787 676 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 KPNA1P52294 538 aaPredicted RBP14.73□□□□□ -0.05
VPS25-201ENST00000253794 KRT83P78385 493 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 RING1Q06587 406 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 USP4Q13107 963 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 SLC25A52Q3SY17 297 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 DCAF6Q58WW2 860 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 OTUD1Q5VV17 481 aaPredicted RBP14.73□□□□□ -0.05
VPS25-201ENST00000253794 MTSS1LQ765P7 747 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 RSRC2Q7L4I2 434 aaKnown RBP14.73□□□□□ -0.05
VPS25-201ENST00000253794 DDX42Q86XP3 938 aaKnown RBP eCLIP14.73□□□□□ -0.05
VPS25-201ENST00000253794 ARID3BQ8IVW6 561 aaPredicted RBP14.73□□□□□ -0.05
VPS25-201ENST00000253794 ADHFE1Q8IWW8 467 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 CELF5Q8N6W0 485 aaKnown RBP14.73□□□□□ -0.05
VPS25-201ENST00000253794 JOSD2Q8TAC2 188 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 CENPIQ92674 756 aaPredicted RBP14.73□□□□□ -0.05
VPS25-201ENST00000253794 USP13Q92995 863 aaPredicted RBP14.73□□□□□ -0.05
VPS25-201ENST00000253794 NXPE3Q969Y0 559 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 ARHGEF26Q96DR7 871 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 SERPINB11Q96P15 392 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 ASB2Q96Q27 587 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 CYP2S1Q96SQ9 504 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 SLITRK6Q9H5Y7 841 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 TDP1Q9NUW8 608 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 MARCH2Q9P0N8 246 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 LCMT1Q9UIC8 334 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 STAP1Q9ULZ2 295 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 PCDHA13Q9Y5I0 950 aa14.73□□□□□ -0.05
VPS25-201ENST00000253794 A0A0A6YYK5 440 aaPredicted RBP14.72□□□□□ -0.05
VPS25-201ENST00000253794 FAM170AA1A519 330 aa14.72□□□□□ -0.05
VPS25-201ENST00000253794 C19orf67A6NJJ6 358 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms