RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 HOXB2P14652 356 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 NTSR1P30989 418 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 PSMC2P35998 433 aaKnown RBP13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 PLA2G4AP47712 749 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 GCLMP48507 274 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 PGFP49763 221 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 PSEN1P49768 467 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 IRX4P78413 519 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 DPYDQ12882 1025 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 MAP7D1Q3KQU3 841 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 TRIM61Q5EBN2 209 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 LYSMD4Q5XG99 296 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 KLHDC10Q6PID8 442 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 SYT12Q8IV01 421 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 TMEFF1Q8IYR6 380 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 GUF1Q8N442 669 aaKnown RBP13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 TIGD1Q96MW7 591 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 TWNKQ96RR1 684 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 MARK1Q9P0L2 795 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 DNMT3LQ9UJW3 386 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 STARD13Q9Y3M8 1113 aa13.6□□□□□ -0.23
APOBEC3A-201ENST00000249116 A0A1W2PQH9 124 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 CACNG3O60359 315 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 GREM1O60565 184 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 CILPO75339 1184 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 RALAP11233 206 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 TYRP14679 529 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 CD58P19256 250 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 PPP3CAQ08209 521 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 ADAM9Q13443 819 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 C10orf120Q5SQS8 335 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 SLC36A4Q6YBV0 504 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 TPGS1Q6ZTW0 290 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 ARMCX6Q7L4S7 300 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 GPRIN1Q7Z2K8 1008 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 CHPFQ8IZ52 775 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 TTC39CQ8N584 583 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 TAS1R2Q8TE23 839 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 CDK5RAP1Q96SZ6 601 aaKnown RBP13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 MMRN2Q9H8L6 949 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 APOBEC3GQ9HC16 384 aaKnown RBP13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 TMEM8AQ9HCN3 771 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 OSER1Q9NX31 292 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 MBD1Q9UIS9 605 aaPredicted RBP13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 NAGPAQ9UK23 515 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 MAPK8IP1Q9UQF2 711 aa13.59□□□□□ -0.23
APOBEC3A-201ENST00000249116 CDX4O14627 284 aaPredicted RBP13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 TRIM24O15164 1050 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 ZNF217O75362 1048 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 CEACAM1P13688 526 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 GABRG2P18507 467 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 CSRP1P21291 193 aaKnown RBP13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 GTF2H1P32780 548 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 HOXD12P35452 270 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 WASP42768 502 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 PTGER3P43115 390 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 DGKGP49619 791 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 KIF11P52732 1056 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 PNOCQ13519 176 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 UAP1L1Q3KQV9 507 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 SH3PXD2AQ5TCZ1 1133 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 KRT39Q6A163 491 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 CCDC186Q7Z3E2 898 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 ZNF276Q8N554 614 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 FRMD1Q8N878 549 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 FAXDC2Q96IV6 333 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 GBP4Q96PP9 640 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 DUSP16Q9BY84 665 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 NMUR1Q9HB89 426 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 ZNF510Q9Y2H8 683 aa13.58□□□□□ -0.24
APOBEC3A-201ENST00000249116 STX10O60499 249 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 COG7P83436 770 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 RPL6Q02878 288 aaKnown RBP13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 ZNF252P-AS1Q0IIN9 211 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 EDRF1Q3B7T1 1238 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 PPP1R26Q5T8A7 1209 aaPredicted RBP13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 EGFLAMQ63HQ2 1017 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 SLC23A3Q6PIS1 610 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 RABEPKQ7Z6M1 372 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 CEP76Q8TAP6 659 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 HEXIM2Q96MH2 286 aaKnown RBP13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 TMEM74BQ9NUR3 256 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 CLIC5Q9NZA1 410 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 CALCOCO1Q9P1Z2 691 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 NUDT5Q9UKK9 219 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 SDK1Q7Z5N4 2213 aa13.57□□□□□ -0.24
APOBEC3A-201ENST00000249116 A0A1W2PQF6 199 aa13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 GFRA2O00451 464 aa13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 MDM4O15151 490 aa13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 STC2O76061 302 aa13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 CFIP05156 583 aa13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 CHKAP35790 457 aa13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 MXI1P50539 228 aa13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 ATXN3P54252 364 aaPredicted RBP13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 SLC8A3P57103 927 aa13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 DUOXA1Q1HG43 343 aa13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 ZNF394Q53GI3 561 aa13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 PEAR1Q5VY43 1037 aaPredicted RBP13.56□□□□□ -0.24
APOBEC3A-201ENST00000249116 Q6ZNB5 142 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms