RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 USP3Q9Y6I4 520 aa14.33□□□□□ -0.12
SNRNP27-201ENST00000244227 NLRC5Q86WI3 1866 aa14.33□□□□□ -0.12
SNRNP27-201ENST00000244227 COL4A4P53420 1690 aaPredicted RBP14.33□□□□□ -0.12
SNRNP27-201ENST00000244227 M0QYT0 321 aa14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 CYP2F1P24903 491 aa14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 RDXP35241 583 aaKnown RBP14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 CCL23P55773 120 aa14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 GPS1Q13098 491 aa14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 C1orf228Q6PIY5 440 aa14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 HIPK3Q9H422 1215 aa14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 WDR6Q9NNW5 1121 aaKnown RBP14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 PNPLA8Q9NP80 782 aa14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 TMPRSS4Q9NRS4 437 aa14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 PIGVQ9NUD9 493 aa14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 MARCH5Q9NX47 278 aa14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 STAP1Q9ULZ2 295 aa14.32□□□□□ -0.12
SNRNP27-201ENST00000244227 APOL1O14791 398 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 MCF2LO15068 1137 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 RIPK2O43353 540 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 TADA2AO75478 443 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 IFNB1P01574 187 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 LTFP02788 710 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 SHBGP04278 402 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 TGM2P21980 687 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 TLE2Q04725 743 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 MRPL58Q14197 206 aaKnown RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 SLC29A2Q14542 456 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 TRIM60Q495X7 471 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 RNASEH2BQ5TBB1 312 aaKnown RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 B4GALNT4Q76KP1 1039 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 PSTKQ8IV42 348 aaKnown RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 ABI1Q8IZP0 508 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 GOLGA6L1Q8N7Z2 621 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 IRGQQ8WZA9 623 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 P3H4Q92791 437 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 PGAP3Q96FM1 320 aaPredicted RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 TOX2Q96NM4 488 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 CSPG4P5Q96PW8 444 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 CWC15Q9P013 229 aaKnown RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 TPX2Q9ULW0 747 aaKnown RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 SCN5AQ14524 2016 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 GOLGA6CA6NDK9 693 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 I6L893 689 aaPredicted RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 TNFRSF10BO14763 440 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 SYN3O14994 580 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 GOLGA6DP0CG33 693 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 CYP2C18P33260 490 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 RPL22P35268 128 aaKnown RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 SLC11A1P49279 550 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 BCAR1P56945 870 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 DEUP1Q05D60 604 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 VARS2Q5ST30 1063 aaKnown RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 ZC3H18Q86VM9 953 aaKnown RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 CCDC25Q86WR0 208 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 SPATA2LQ8IUW3 424 aaPredicted RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 FAM71DQ8N9W8 422 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 SCAMP5Q8TAC9 235 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 ADAM32Q8TC27 787 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 VWCEQ96DN2 955 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 GPR62Q9BZJ7 368 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 PPP1R12CQ9BZL4 782 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 CDC42EP4Q9H3Q1 356 aaKnown RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 USP29Q9HBJ7 922 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 ANLNQ9NQW6 1124 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 DNAJC17Q9NVM6 304 aaKnown RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 GOLGA6AQ9NYA3 693 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 ADAM28Q9UKQ2 775 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 LRFN2Q9ULH4 789 aa14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 FARP1Q9Y4F1 1045 aaPredicted RBP14.31□□□□□ -0.12
SNRNP27-201ENST00000244227 TTC3P53804 2025 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 PTPRDP23468 1912 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 SYNJ2BP-COX16A0A087WUM0 186 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 CAPN9O14815 690 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 TRAPPC3O43617 180 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 AMHP03971 560 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 ALDH2P05091 517 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 NCAM1P13591 858 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 GOT1P17174 413 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 NRLP54845 237 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 SLC10A2Q12908 348 aaPredicted RBP14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 NME3Q13232 169 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 SLC39A12Q504Y0 691 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 C1orf53Q5VUE5 145 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 KCTD16Q68DU8 428 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 C4orf50Q6ZRC1 276 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 TRMT10CQ7L0Y3 403 aaKnown RBP14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 NPAS4Q8IUM7 802 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 RELL1Q8IUW5 271 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 ZCCHC9Q8N567 271 aaKnown RBP14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 SH2D3CQ8N5H7 860 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 SLC7A14Q8TBB6 771 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 RSAD2Q8WXG1 361 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 EXOC4Q96A65 974 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 SLC9A7Q96T83 725 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 TSPYL1Q9H0U9 437 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 ETNK2Q9NVF9 386 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 COX16Q9P0S2 106 aa14.3□□□□□ -0.12
SNRNP27-201ENST00000244227 DCDC2CA8MYV0 355 aa14.29□□□□□ -0.12
SNRNP27-201ENST00000244227 FGFR3P22607 806 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms