RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 KCNJ1P48048 391 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 HARS2P49590 506 aaKnown RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 RTP1P59025 263 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 ZNF280AP59817 542 aaPredicted RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 BOLA3Q53S33 107 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CELF3Q5SZQ8 465 aaKnown RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 MFSD5Q6N075 450 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 PID1Q7Z2X4 250 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 USP6NLQ92738 828 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 THAP11Q96EK4 314 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 ZFRQ96KR1 1074 aaKnown RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 WWP1Q9H0M0 922 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 TMEM134Q9H6X4 195 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 OSGEPQ9NPF4 335 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 KANSL3Q9P2N6 904 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 NAALADL1Q9UQQ1 740 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 RGPD5Q99666 1765 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 ASTN1O14525 1302 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 PSTPIP1O43586 416 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 LSM8O95777 96 aaKnown RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 RRM1P23921 792 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 FLT3LGP49771 235 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 AMHR2Q16671 573 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 BMT2Q1RMZ1 405 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CBWD6Q4V339 395 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CBWD3Q5JTY5 395 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CBWD5Q5RIA9 395 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CHSY1Q86X52 802 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CRLF3Q8IUI8 442 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 ENDOVQ8N8Q3 282 aaKnown RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 OR6P1Q8NGX9 317 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 TRAPPC12Q8WVT3 735 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 ASB7Q9H672 318 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 WHRNQ9P202 907 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 UMODL1Q5DID0 1318 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CST8O60676 142 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 ACO1P21399 889 aaKnown RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 IGFBP4P22692 258 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CCNFP41002 786 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 CLK2P49760 499 aaKnown RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 PRAMEP78395 509 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 GALNTL6Q49A17 601 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 KHDC1Q4VXA5 237 aaKnown RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 HP1BP3Q5SSJ5 553 aaPredicted RBP11.35□□□□□ -0.59
COPA-201ENST00000241704 GPR142Q7Z601 462 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 PPM1NQ8N819 430 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 TIMMDC1Q9NPL8 285 aa11.35□□□□□ -0.59
COPA-201ENST00000241704 KCNN4O15554 427 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 ESRRBO95718 433 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 ITGA8P53708 1063 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 INAQ16352 499 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 ARSHQ5FYA8 562 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 ARHGEF19Q8IW93 802 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 ABRAQ8N0Z2 381 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 TMEM161BQ8NDZ6 487 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 HASPINQ8TF76 798 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 ARHGEF26Q96DR7 871 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 RBM15Q96T37 977 aaKnown RBP eCLIP11.34□□□□□ -0.59
COPA-201ENST00000241704 KCTD10Q9H3F6 313 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 ATRNL1Q5VV63 1379 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 GNAZP19086 355 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 GALK1P51570 392 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 OVGP1Q12889 678 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 RRP1BQ14684 758 aaKnown RBP11.34□□□□□ -0.59
COPA-201ENST00000241704 CLEC16AQ2KHT3 1053 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 PRAMEF19Q5SWL8 479 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 IL31Q6EBC2 164 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 ZNF280DQ6N043 979 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 PABPC5Q96DU9 382 aaKnown RBP11.34□□□□□ -0.59
COPA-201ENST00000241704 APBA2Q99767 749 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 MUC3BQ9H195 1237 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 TISP43B9A030 160 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 AMHP03971 560 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 TMPRSS15P98073 1019 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 DCAF6Q58WW2 860 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 SLC51AQ86UW1 340 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 DDHD1Q8NEL9 900 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 ZBTB45Q96K62 511 aaPredicted RBP11.34□□□□□ -0.59
COPA-201ENST00000241704 BTBD6Q96KE9 485 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 COL1A1P02452 1464 aaPredicted RBP11.34□□□□□ -0.59
COPA-201ENST00000241704 MYH8P13535 1937 aa11.34□□□□□ -0.59
COPA-201ENST00000241704 F5H423 210 aaPredicted RBP11.33□□□□□ -0.59
COPA-201ENST00000241704 CYB561D2O14569 222 aa11.33□□□□□ -0.59
COPA-201ENST00000241704 LGALS2P05162 132 aa11.33□□□□□ -0.59
COPA-201ENST00000241704 RBP3P10745 1247 aa11.33□□□□□ -0.59
COPA-201ENST00000241704 RPL5P46777 297 aaKnown RBP11.33□□□□□ -0.59
COPA-201ENST00000241704 C2CD6Q53TS8 623 aa11.33□□□□□ -0.59
COPA-201ENST00000241704 TSHZ1Q6ZSZ6 1077 aa11.33□□□□□ -0.59
COPA-201ENST00000241704 TMPRSS6Q8IU80 811 aa11.33□□□□□ -0.59
COPA-201ENST00000241704 RASGEF1CQ8N431 466 aa11.33□□□□□ -0.59
COPA-201ENST00000241704 CCDC124Q96CT7 223 aaKnown RBP11.33□□□□□ -0.59
COPA-201ENST00000241704 SERPINI1Q99574 410 aa11.33□□□□□ -0.59
COPA-201ENST00000241704 PPCSQ9HAB8 311 aa11.33□□□□□ -0.59
COPA-201ENST00000241704 DTNAQ9Y4J8 743 aa11.33□□□□□ -0.59
COPA-201ENST00000241704 ASMTLO95671 621 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 MX2P20592 715 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 GLRA2P23416 452 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 PRKCIP41743 596 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms