RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 DCLK2Q8N568 766 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 TSTD1Q8NFU3 115 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 SCAMP5Q8TAC9 235 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 NETO1Q8TDF5 533 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 CHFRQ96EP1 664 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 TMEM176AQ96HP8 235 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 SMOQ99835 787 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 SDCBP2Q9H190 292 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 GOLPH3LQ9H4A5 285 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 SMPD4Q9NXE4 827 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 MAP10Q9P2G4 905 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 DEC1Q9P2X7 70 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 HESX1Q9UBX0 185 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 COQ4Q9Y3A0 265 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 NME7Q9Y5B8 376 aa13.42□□□□□ -0.26
PDZD11-201ENST00000239666 PMM2O15305 246 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 P4HA2O15460 535 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 HOXC11O43248 304 aaPredicted RBP13.41□□□□□ -0.26
PDZD11-201ENST00000239666 KAT7O95251 611 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 F12P00748 615 aaPredicted RBP13.41□□□□□ -0.26
PDZD11-201ENST00000239666 CYP17A1P05093 508 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 TRIM49P0CI25 452 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 TRIM49CP0CI26 452 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 CCDC130P13994 396 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 CD58P19256 250 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 ACO1P21399 889 aaKnown RBP13.41□□□□□ -0.26
PDZD11-201ENST00000239666 ADORA2BP29275 332 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 CACNA2D1P54289 1103 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 PNOCQ13519 176 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 STILQ15468 1287 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 RHBDF2Q6PJF5 856 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 CLEC20AQ6ZU45 233 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 CCDC186Q7Z3E2 898 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 C12orf29Q8N999 325 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 ENGASEQ8NFI3 743 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 FAM81BQ96LP2 452 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 MMRN2Q9H8L6 949 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 GDPD2Q9HCC8 539 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 ARHGEF4Q9NR80 690 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 SPHK2Q9NRA0 654 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 CISHQ9NSE2 258 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 OLA1Q9NTK5 396 aaKnown RBP13.41□□□□□ -0.26
PDZD11-201ENST00000239666 SEMA4GQ9NTN9 838 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 FAM49BQ9NUQ9 324 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 STRIP2Q9ULQ0 834 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 MMP17Q9ULZ9 603 aa13.41□□□□□ -0.26
PDZD11-201ENST00000239666 TBC1D3BA6NDS4 549 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 NPC1O15118 1278 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 OPRD1P41143 372 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 KIF11P52732 1056 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 ZNF132P52740 706 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 RSPO4Q2I0M5 234 aaPredicted RBP13.4□□□□□ -0.26
PDZD11-201ENST00000239666 DCAF17Q5H9S7 520 aaPredicted RBP13.4□□□□□ -0.26
PDZD11-201ENST00000239666 SPDYCQ5MJ68 293 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 ARHGAP17Q68EM7 881 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 SPOPLQ6IQ16 392 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 C12orf50Q8NA57 414 aaPredicted RBP13.4□□□□□ -0.26
PDZD11-201ENST00000239666 ANKRD52Q8NB46 1076 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 RIN3Q8TB24 985 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 USP33Q8TEY7 942 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 RMDN1Q96DB5 314 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 SPACA7Q96KW9 195 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 FBRSL1Q9HCM7 1045 aaKnown RBP13.4□□□□□ -0.26
PDZD11-201ENST00000239666 GMIPQ9P107 970 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 SPAG17Q6Q759 2223 aa13.4□□□□□ -0.26
PDZD11-201ENST00000239666 K7EQS6 105 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 ZNF806P0C7X5 589 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 RARGP13631 454 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 BCAT1P54687 386 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 ZNF445P59923 1031 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 ZXDBP98169 803 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 SPEM2Q0P670 501 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 CRY1Q16526 586 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 ANO4Q32M45 955 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 SGO2Q562F6 1265 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 C2orf27AQ580R0 203 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 LY6G5CQ5SRR4 150 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 ANKRD40Q6AI12 368 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 ZC3H3Q8IXZ2 948 aaKnown RBP13.39□□□□□ -0.27
PDZD11-201ENST00000239666 TRIML1Q8N9V2 468 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 ZMIZ2Q8NF64 920 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 CNOT6LQ96LI5 555 aaKnown RBP13.39□□□□□ -0.27
PDZD11-201ENST00000239666 CCSER2Q9H7U1 834 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 APOBEC3GQ9HC16 384 aaKnown RBP13.39□□□□□ -0.27
PDZD11-201ENST00000239666 VPS45Q9NRW7 570 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 TMEM30AQ9NV96 361 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.39□□□□□ -0.27
PDZD11-201ENST00000239666 MARK1Q9P0L2 795 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 NAGPAQ9UK23 515 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 STARD13Q9Y3M8 1113 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 USP3Q9Y6I4 520 aa13.39□□□□□ -0.27
PDZD11-201ENST00000239666 WDR87Q6ZQQ6 2873 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 ATG2BQ96BY7 2078 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 EPN2O95208 641 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 CYBBP04839 570 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 VDRP11473 427 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 LIMK1P53667 647 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 CUL2Q13617 745 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 CCDC40Q4G0X9 1142 aa13.38□□□□□ -0.27
PDZD11-201ENST00000239666 C10orf120Q5SQS8 335 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms