RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 DDR2Q16832 855 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 PRSS55Q6UWB4 352 aaPredicted RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 BEND5Q7L4P6 421 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 TTC9BQ8N6N2 239 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 TTC13Q8NBP0 860 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 ACTL9Q8TC94 416 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 EDEM1Q92611 657 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 HAUS1Q96CS2 278 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 PGAP3Q96FM1 320 aaPredicted RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 MAGEB5Q9BZ81 275 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 IL23AQ9NPF7 189 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 PIGVQ9NUD9 493 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 RRN3Q9NYV6 651 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 GRHL1Q9NZI5 618 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 FZD10Q9ULW2 581 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 AP4E1Q9UPM8 1137 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 DRG1Q9Y295 367 aaKnown RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 SNX24Q9Y343 169 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 MTMR11A4FU01 709 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 APOC4-APOC2K7ER74 178 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 VNN2O95498 520 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 GAS8O95995 478 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 APOC2P02655 101 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 CPB1P15086 417 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 TNNT3P45378 269 aaPredicted RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 RPL21P46778 160 aaKnown RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 VCPP55072 806 aaKnown RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 OTUD4Q01804 1114 aaKnown RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 SMARCB1Q12824 385 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 NME3Q13232 169 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 NNTQ13423 1086 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 PTK6Q13882 451 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 PPP1R7Q15435 360 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 OASLQ15646 514 aaKnown RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 USP41Q3LFD5 358 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 C16orf59Q7L2K0 433 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 PSTKQ8IV42 348 aaKnown RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 CMTR2Q8IYT2 770 aaKnown RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 SLC7A14Q8TBB6 771 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 FAF2Q96CS3 445 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 CCDC114Q96M63 670 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 SLC9A7Q96T83 725 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 ZNF670Q9BS34 389 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 FRMD8P1Q9BZ68 369 aaPredicted RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 MCOLN1Q9GZU1 580 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 DHX35Q9H5Z1 703 aaKnown RBP15.84■□□□□ 0.13
HDHD3-201ENST00000238379 ZDHHC18Q9NUE0 388 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 FAM53CQ9NYF3 392 aa15.84■□□□□ 0.13
HDHD3-201ENST00000238379 TRIM66O15016 1216 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 GPR15P49685 360 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 LMNB2Q03252 620 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 TFDP2Q14188 446 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 ANKRD20A8PQ5CZ79 823 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 PPP6R3Q5H9R7 873 aaPredicted RBP15.83■□□□□ 0.12
HDHD3-201ENST00000238379 SDHAF4Q5VUM1 108 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 RNF19BQ6ZMZ0 732 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 SLC39A11Q8N1S5 342 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 PQLC3Q8N755 202 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 PCDH19Q8TAB3 1148 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 ADAM32Q8TC27 787 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 SPPL2BQ8TCT7 592 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 PIK3R5Q8WYR1 880 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 KCTD15Q96SI1 283 aaPredicted RBP15.83■□□□□ 0.12
HDHD3-201ENST00000238379 MAK16Q9BXY0 300 aaKnown RBP15.83■□□□□ 0.12
HDHD3-201ENST00000238379 CRISPLD1Q9H336 500 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 WDR6Q9NNW5 1121 aaKnown RBP15.83■□□□□ 0.12
HDHD3-201ENST00000238379 MTRRQ9UBK8 725 aa15.83■□□□□ 0.12
HDHD3-201ENST00000238379 SYNJ2BP-COX16A0A087WUM0 186 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 ITGAVP06756 1048 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 PECAM1P16284 738 aaPredicted RBP15.82■□□□□ 0.12
HDHD3-201ENST00000238379 IVDP26440 423 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 YWHAGP61981 247 aaKnown RBP eCLIP15.82■□□□□ 0.12
HDHD3-201ENST00000238379 IFRD2Q12894 506 aaPredicted RBP15.82■□□□□ 0.12
HDHD3-201ENST00000238379 BTG3Q14201 252 aaPredicted RBP15.82■□□□□ 0.12
HDHD3-201ENST00000238379 SPOUT1Q5T280 376 aaKnown RBP15.82■□□□□ 0.12
HDHD3-201ENST00000238379 SLC9A4Q6AI14 798 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 SLC8B1Q6J4K2 584 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 ZDHHC24Q6UX98 284 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 OTOP2Q7RTS6 562 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 SCD5Q86SK9 330 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 NUP93Q8N1F7 819 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 FBXO22Q8NEZ5 403 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 ZNF558Q96NG5 402 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 TRIM62Q9BVG3 475 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 TMPRSS4Q9NRS4 437 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 DDIT4Q9NX09 232 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 IL37Q9NZH6 218 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 COX16Q9P0S2 106 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 ZNF148Q9UQR1 794 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 BACE2Q9Y5Z0 518 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 CDY1Q9Y6F8 540 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 MRPL42Q9Y6G3 142 aaKnown RBP15.82■□□□□ 0.12
HDHD3-201ENST00000238379 ADAM12O43184 909 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 F9P00740 461 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 GBP1P32455 592 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 ADRA1BP35368 520 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 PGFP49763 221 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 PYROXD2Q8N2H3 581 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 ALLCQ8N6M5 410 aa15.82■□□□□ 0.12
HDHD3-201ENST00000238379 PLD5Q8N7P1 536 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms