RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ETNK2Q9NVF9 386 aa16.8■□□□□ 0.28
UBE3D-201ENST00000237186 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBE3D-201ENST00000237186 RCOR3Q9P2K3 495 aaPredicted RBP16.8■□□□□ 0.28
UBE3D-201ENST00000237186 PHTF1Q9UMS5 762 aa16.8■□□□□ 0.28
UBE3D-201ENST00000237186 IQANK1A0A1B0GTG1 560 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 KBTBD13C9JR72 458 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 TRDMT1O14717 391 aaKnown RBP16.79■□□□□ 0.28
UBE3D-201ENST00000237186 XPO1O14980 1071 aaKnown RBP16.79■□□□□ 0.28
UBE3D-201ENST00000237186 HCRTO43612 131 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 MGRN1O60291 552 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 EDF1O60869 148 aaKnown RBP16.79■□□□□ 0.28
UBE3D-201ENST00000237186 GSTA2P09210 222 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 ADORA2BP29275 332 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 LRPAP1P30533 357 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 MAGEA3P43357 314 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 SOX4Q06945 474 aaPredicted RBP16.79■□□□□ 0.28
UBE3D-201ENST00000237186 MGAT5Q09328 741 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 DNAJC3Q13217 504 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 HHATQ5VTY9 493 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 AGGF1Q8N302 714 aaeCLIP16.79■□□□□ 0.28
UBE3D-201ENST00000237186 SMG8Q8ND04 991 aaKnown RBP16.79■□□□□ 0.28
UBE3D-201ENST00000237186 SLC2A14Q8TDB8 520 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 LRRC8CQ8TDW0 803 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 CLEC4CQ8WTT0 213 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 APOL6Q9BWW8 343 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 FLRT1Q9NZU1 646 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 AP4E1Q9UPM8 1137 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 IPPQ9Y573 584 aa16.79■□□□□ 0.28
UBE3D-201ENST00000237186 HUS1O60921 280 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 IGHA2P01877 340 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 TPSB2P20231 275 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 SKIV2L2P42285 1042 aaKnown RBP16.78■□□□□ 0.28
UBE3D-201ENST00000237186 MATKP42679 507 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 LILRA4P59901 499 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 YWHAZP63104 245 aaKnown RBP16.78■□□□□ 0.28
UBE3D-201ENST00000237186 SLC18A2Q05940 514 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 SLC10A2Q12908 348 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-201ENST00000237186 TPSAB1Q15661 275 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 FAM133BQ5BKY9 247 aaKnown RBP16.78■□□□□ 0.28
UBE3D-201ENST00000237186 PPP6R3Q5H9R7 873 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-201ENST00000237186 LVRNQ6Q4G3 990 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 BNIPLQ7Z465 357 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 CAND1Q86VP6 1230 aaKnown RBP16.78■□□□□ 0.28
UBE3D-201ENST00000237186 CCDC63Q8NA47 563 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 ZNF75CPQ92670 426 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-201ENST00000237186 RMDN2Q96LZ7 410 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 CSPG4P5Q96PW8 444 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 KATNAL1Q9BW62 490 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 DUSP16Q9BY84 665 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 DHX35Q9H5Z1 703 aaKnown RBP16.78■□□□□ 0.28
UBE3D-201ENST00000237186 ETNK1Q9HBU6 452 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 RNF19AQ9NV58 838 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 KLK14Q9P0G3 267 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 GNAT1P11488 350 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 LCP1P13796 627 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 NCALDP61601 193 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 SLC25A52Q3SY17 297 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 KBTBD12Q3ZCT8 623 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 ZNF618Q5T7W0 954 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 FAM47EQ6ZV65 393 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 ECHDC2Q86YB7 292 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 PARP9Q8IXQ6 854 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 ADGRF2Q8IZF7 708 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 KCTD13Q8WZ19 329 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 NT5C3BQ969T7 300 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 KCTD15Q96SI1 283 aaPredicted RBP16.78■□□□□ 0.28
UBE3D-201ENST00000237186 POPDC2Q9HBU9 364 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 CPA4Q9UI42 421 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 ZNF180Q9UJW8 692 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 USP3Q9Y6I4 520 aa16.78■□□□□ 0.28
UBE3D-201ENST00000237186 C17orf102A2RUQ5 167 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 AVILO75366 819 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 ALADP13716 330 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 PRKCHP24723 683 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 ATXN1P54253 815 aaKnown RBP16.77■□□□□ 0.27
UBE3D-201ENST00000237186 ELF3P78545 371 aaPredicted RBP16.77■□□□□ 0.27
UBE3D-201ENST00000237186 GBE1Q04446 702 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 PTK7Q13308 1070 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 SLC26A11Q86WA9 606 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 OSTM1Q86WC4 334 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 B3GALNT2Q8NCR0 500 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 ARRDC4Q8NCT1 418 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 TCP10LQ8TDR4 215 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 PPP1R13LQ8WUF5 828 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 APBB2Q92870 758 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 QKIQ96PU8 341 aaKnown RBP eCLIP16.77■□□□□ 0.27
UBE3D-201ENST00000237186 TTLL3Q9Y4R7 772 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 IKBKGQ9Y6K9 419 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 USH1CQ9Y6N9 552 aa16.77■□□□□ 0.27
UBE3D-201ENST00000237186 HACD1B0YJ81 288 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 GABRDO14764 452 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 DGKIO75912 1065 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 MT-ND3P03897 115 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 INHBAP08476 426 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 DHRS4L1P0CG22 281 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 ZNF157P51786 506 aaPredicted RBP16.76■□□□□ 0.27
UBE3D-201ENST00000237186 YWHAGP61981 247 aaKnown RBP eCLIP16.76■□□□□ 0.27
UBE3D-201ENST00000237186 MTM1Q13496 603 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 KCNT2Q6UVM3 1135 aa16.76■□□□□ 0.27
UBE3D-201ENST00000237186 BZW1Q7L1Q6 419 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms