RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 YJEFN3A6XGL0 299 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 E7ENQ6 273 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 ETS1P14921 441 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 YY1P25490 414 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 NR2C2P49116 596 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 BCAR1P56945 870 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 SKOR1P84550 965 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 SYPL2Q5VXT5 272 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 GPRIN1Q7Z2K8 1008 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 ANKRD33Q7Z3H0 272 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 PRUNE1Q86TP1 453 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 UNC45BQ8IWX7 931 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 CCDC185Q8N715 623 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 HASPINQ8TF76 798 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 RTP4Q96DX8 246 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 ROPN1BQ9BZX4 212 aaPredicted RBP23.05■■□□□ 1.28
GCA-201ENST00000233612 ROPN1Q9HAT0 212 aaPredicted RBP23.05■■□□□ 1.28
GCA-201ENST00000233612 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.05■■□□□ 1.28
GCA-201ENST00000233612 PCDHB7Q9Y5E2 793 aa23.05■■□□□ 1.28
GCA-201ENST00000233612 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.04■■□□□ 1.28
GCA-201ENST00000233612 A6NNZ2 444 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 SYN3O14994 580 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 TTC4O95801 387 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 BDNFP23560 247 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 GDF10P55107 478 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 CBLBQ13191 982 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 XRCC4Q13426 336 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 TUBB8Q3ZCM7 444 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 C4orf50Q6ZRC1 276 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 HFE2Q6ZVN8 426 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 HOOK3Q86VS8 718 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 NTAN1Q96AB6 310 aa23.04■■□□□ 1.28
GCA-201ENST00000233612 FAM193BQ96PV7 902 aaPredicted RBP23.04■■□□□ 1.28
GCA-201ENST00000233612 DHX35Q9H5Z1 703 aaKnown RBP23.04■■□□□ 1.28
GCA-201ENST00000233612 BCLAF3A2AJT9 711 aaKnown RBP23.03■■□□□ 1.28
GCA-201ENST00000233612 F8W810 466 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 CXCL10P02778 98 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 CYP2F1P24903 491 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 RPL22P35268 128 aaKnown RBP23.03■■□□□ 1.28
GCA-201ENST00000233612 TTC3P53804 2025 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 ROR1Q01973 937 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 IFFO1Q0D2I5 559 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 MTFR1Q15390 333 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 PGM2Q96G03 612 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 KCTD15Q96SI1 283 aaPredicted RBP23.03■■□□□ 1.28
GCA-201ENST00000233612 ZCWPW1Q9H0M4 648 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 USP29Q9HBJ7 922 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 NAALADL1Q9UQQ1 740 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 PATJQ8NI35 1801 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 CEP350Q5VT06 3117 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 M0QYT0 321 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 HOXA2O43364 376 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 F9P00740 461 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 LTFP02788 710 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 USP17L7P0C7H9 530 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 CCL5P13501 91 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 RNASELQ05823 741 aaKnown RBP23.03■■□□□ 1.28
GCA-201ENST00000233612 SCAPQ12770 1279 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 NPNTQ6UXI9 565 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 CCDC25Q86WR0 208 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 TOX2Q96NM4 488 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 CASD1Q96PB1 797 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 CSPG4P5Q96PW8 444 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 TMEM209Q96SK2 561 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 TRIM62Q9BVG3 475 aa23.03■■□□□ 1.28
GCA-201ENST00000233612 IFNB1P01574 187 aa23.02■■□□□ 1.28
GCA-201ENST00000233612 SHBGP04278 402 aa23.02■■□□□ 1.28
GCA-201ENST00000233612 OR1G1P47890 313 aa23.02■■□□□ 1.28
GCA-201ENST00000233612 DEUP1Q05D60 604 aa23.02■■□□□ 1.28
GCA-201ENST00000233612 MRPL58Q14197 206 aaKnown RBP23.02■■□□□ 1.28
GCA-201ENST00000233612 PPP6R3Q5H9R7 873 aaPredicted RBP23.02■■□□□ 1.28
GCA-201ENST00000233612 C6orf118Q5T5N4 469 aa23.02■■□□□ 1.28
GCA-201ENST00000233612 DARS2Q6PI48 645 aaKnown RBP23.02■■□□□ 1.28
GCA-201ENST00000233612 KDM7AQ6ZMT4 941 aa23.02■■□□□ 1.28
GCA-201ENST00000233612 FAM131BQ86XD5 332 aa23.02■■□□□ 1.28
GCA-201ENST00000233612 PPIL6Q8IXY8 311 aa23.02■■□□□ 1.28
GCA-201ENST00000233612 CWC15Q9P013 229 aaKnown RBP23.02■■□□□ 1.28
GCA-201ENST00000233612 CAPN9O14815 690 aa23.01■■□□□ 1.27
GCA-201ENST00000233612 TCEA3O75764 348 aa23.01■■□□□ 1.27
GCA-201ENST00000233612 PITX1P78337 314 aaPredicted RBP23.01■■□□□ 1.27
GCA-201ENST00000233612 KRT71Q3SY84 523 aa23.01■■□□□ 1.27
GCA-201ENST00000233612 C1orf53Q5VUE5 145 aa23.01■■□□□ 1.27
GCA-201ENST00000233612 DCP1BQ8IZD4 617 aaKnown RBP23.01■■□□□ 1.27
GCA-201ENST00000233612 NAT8LQ8N9F0 302 aa23.01■■□□□ 1.27
GCA-201ENST00000233612 PRCCQ92733 491 aaPredicted RBP23.01■■□□□ 1.27
GCA-201ENST00000233612 FUBP3Q96I24 572 aaKnown RBP eCLIP23.01■■□□□ 1.275e-7■■□□□ 13
GCA-201ENST00000233612 RNF208Q9H0X6 261 aa23.01■■□□□ 1.27
GCA-201ENST00000233612 WDR6Q9NNW5 1121 aaKnown RBP23.01■■□□□ 1.27
GCA-201ENST00000233612 DNAJB4Q9UDY4 337 aa23.01■■□□□ 1.27
GCA-201ENST00000233612 BRCA2P51587 3418 aa23.01■■□□□ 1.27
GCA-201ENST00000233612 TADA2AO75478 443 aa23■■□□□ 1.27
GCA-201ENST00000233612 ADRA1BP35368 520 aa23■■□□□ 1.27
GCA-201ENST00000233612 ARL4AP40617 200 aa23■■□□□ 1.27
GCA-201ENST00000233612 KCTD16Q68DU8 428 aa23■■□□□ 1.27
GCA-201ENST00000233612 C1orf228Q6PIY5 440 aa23■■□□□ 1.27
GCA-201ENST00000233612 C4orf22Q6V702 233 aa23■■□□□ 1.27
GCA-201ENST00000233612 SPATA2LQ8IUW3 424 aaPredicted RBP23■■□□□ 1.27
GCA-201ENST00000233612 ABI1Q8IZP0 508 aa23■■□□□ 1.27
GCA-201ENST00000233612 FAM71DQ8N9W8 422 aa23■■□□□ 1.27
GCA-201ENST00000233612 TLCD1Q96CP7 247 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms